Entering edit mode
wang peter
★
2.0k
@wang-peter-4647
Last seen 10.0 years ago
i have found a problem
if we allow edit distance as 1, with indel=1
subject aaaaaaATCGACTG
pattern TCGACTG
and i found some reads were trimmed ATCGACTG
not TCGACTG
that is ok for RNA-seq
but not ok for microRNA, if we want to keep the whole microRNA
sequences
--
shan gao
Room 231(Dr.Fei lab)
Boyce Thompson Institute
Cornell University
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