Hi everyone, I am doing transcriptome analysis of a non-model plant species. Is anyone can help me to get TAIR identifiers corresponding to my sequences? I have to blastx more than 20000 sequences. My input data is a fasta file containing all my sequence as briefly presented below: >A02.1 clone=A02 cluster=A02 status=complete CTAACGCAGAACTGATTCTGCCCTTCTGCACCATCGTTGCCATGGATTCTTCAAATTTCTGGTACAGAGT GTGTAAGAACTGCGAGAGAGTGATACCAGACAAGGGAGGTGAGACTTCTTCTGTATCGGG and so on ... >A15.1 clone=A15 cluster=A15 status=complete CGGCACGAGGTCAATCTGCTTTGATTACTTCCGCCGCTCTTGCTTTCTTTGATTAGTTCTGCCGTTTGTG GAAGATTTATCAGAATGGCCAAAAGTCAGGTGGCAAACGGGAGCGTCGTGGTGGTGGCGGCG ... >A20.1 clone=A20 cluster=A20 status=complete CCTTCTGCTATAGATGGAACTGGGCAGTTTGGCATTGGGCCTGATGGACAAAGAAGAGAGCCAGCGAGTA ATGTTCTTCTTGCATCTATTGAAAACATGCAATATGCTGTGACTGTTGATGTTTTGCATACGG ... >From this fasta file, I want to get something like: A02-1 AT2G28105 A15-1 - A20-1 AT5G53180 Thanks, Elie R. > > > > ------------------------------ > > _______________________________________________ > Bioconductor mailing list > Bioconductor@r-project.org > https://stat.ethz.ch/mailman/listinfo/bioconductor > > > End of Bioconductor Digest, Vol 112, Issue 8 > ******************************************** [[alternative HTML version deleted]]