paired analysis in RNA Seq data using DESeq
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Natasha ▴ 440
@natasha-4640
Last seen 10.3 years ago
Dear List, I have some RNASeq data, paired samples (n=4) for a 2 vs 2 comparison: not tumour-normal pairs. I was wondering if DESeq can now deal with paired analysis, especially using the multi-factor design section, as it could not earlier? Though I am aware that the edgeR package deals with paired analysis. Many Thanks, Natasha
RNASeq edgeR DESeq RNASeq edgeR DESeq • 1.3k views
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