DEseq and FDR correction
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@oren-schaedel-5368
Last seen 10.5 years ago
Hello everyone, I'm new to the bioconducter list, and I have a question about DEseq: Is it necessary to perform the FDR correction even though the variance is estimated by the hierarchical model? I ask this because the values of neighboring genes (hypothesis for the FDR) are used for the variance estimation. Do we need to take into account these values again? Thanks for your help -- Oren Schaedel Postdoctoral Fellow, Sternberg Lab. California Institute of Technology 1200 E. California Blvd Pasadena 91125 MC-156-29 USA ++1-626-395-8391 [[alternative HTML version deleted]]
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