Entering edit mode
Andreia Fonseca
▴
810
@andreia-fonseca-3796
Last seen 7.8 years ago
Dear all,
I am trying to install xps and I am getting the following error:
library("xps")
Error in dyn.load(file, DLLpath = DLLpath, ...) :
unable to load shared object
'/Library/Frameworks/R.framework/Versions/2.15/Resources/library/xps/l
ibs/i386/xps.so':
dlopen(/Library/Frameworks/R.framework/Versions/2.15/Resources/library
/xps/libs/i386/xps.so,
6): Library not loaded: /usr/local/root/lib/root/libGui.so
Referenced from:
/Library/Frameworks/R.framework/Versions/2.15/Resources/library/xps/li
bs/i386/xps.so
Reason: image not found
Error: package/namespace load failed for 'xps'
can someone help?
I have downloaded the file using biocLite
> biocLite("xps")
BioC_mirror: http://bioconductor.org
Using Bioconductor version 2.11 (BiocInstaller 1.8.3), R version 2.15.
Installing package(s) 'xps'
trying URL '
http://bioconductor.org/packages/2.11/bioc/bin/macosx/leopard/contrib/
2.15/xps_1.18.1.tgz
'
Content type 'application/x-gzip' length 7208382 bytes (6.9 Mb)
opened URL
==================================================
downloaded 6.9 Mb
tar: Failed to set default locale
The downloaded binary packages are in
/var/folders/mg/mgYnPlsvH50tWM6oW27ypE+++TI/-Tmp-//RtmpubosnY/download
ed_packages
the sessionInfo is the following:
sessionInfo()
R version 2.15.3 (2013-03-01)
Platform: i386-apple-darwin9.8.0/i386 (32-bit)
locale:
[1] C
attached base packages:
[1] stats graphics grDevices utils datasets methods base
other attached packages:
[1] affy_1.36.1 Biobase_2.18.0 BiocGenerics_0.4.0
BiocInstaller_1.8.3
loaded via a namespace (and not attached):
[1] affyio_1.26.0 preprocessCore_1.20.0 tools_2.15.3
zlibbioc_1.4.0
thnaks for the help,
Andreia
----------------------------------------------------------------------
-------------------------
Andreia J. Amaral, PhD
BioFIG - Center for Biodiversity, Functional and Integrative Genomics
Instituto de Medicina Molecular
University of Lisbon
Tel: +352 217500000 (ext. office: 28253)
email:andreiaamaral@fm.ul.pt ; andreiaamaral@fc.ul.pt
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