Can \"virtualArray\" package be applied with created annotation package (.db)?
0
0
Entering edit mode
Guest User ★ 13k
@guest-user-4897
Last seen 11.2 years ago
Dear R helpers, I'm planning to work with several mammal species' gene expression profile. So I have to create some annotations (.db) by "AnnotationForge" package for some species I'm wondering whether I can use created annotations with virtualArray during merging data from different platform. If it can, would you please show me how to do it. Note: I'm extremely weak at R language, please be patient with me :) Best regards, Kaj -- output of sessionInfo(): R version 2.15.3 (2013-03-01) Platform: x86_64-w64-mingw32/x64 (64-bit) locale: [1] LC_COLLATE=Thai_Thailand.874 LC_CTYPE=Thai_Thailand.874 [3] LC_MONETARY=Thai_Thailand.874 LC_NUMERIC=C [5] LC_TIME=Thai_Thailand.874 attached base packages: [1] stats graphics grDevices utils datasets methods base other attached packages: [1] org.Mm.eg.db_2.8.0 mouse.db0_2.8.0 BiocInstaller_1.8.3 [4] AnnotationForge_1.0.3 org.Hs.eg.db_2.8.0 RSQLite_0.11.3 [7] DBI_0.2-6 AnnotationDbi_1.20.7 Biobase_2.18.0 [10] BiocGenerics_0.4.0 loaded via a namespace (and not attached): [1] IRanges_1.16.6 parallel_2.15.3 stats4_2.15.3 tools_2.15.3 -- Sent via the guest posting facility at bioconductor.org.
• 681 views
ADD COMMENT

Login before adding your answer.

Traffic: 820 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6