Entering edit mode
Hi Alejandra-
First, can you check the versions you are using by sending the output
of sessionInfo()? The color bars were added to DiffBind at some point
and are not present in all versions. You need version 1.4.0 or later,
which corresponds to Bioconductor 2.11 (R 2.15).
Next, check the help page for dba.plotHeatmap:
> ?dba.plotHeatmap
All of the heatmaps drawn in the Examples code have category color
bars, if you have a reasonably current version.
Cheers-
Rory
From: Alejandra Eugenia Medina Rivera
<medina.alexiel@gmail.com<mailto:medina.alexiel@gmail.com>>
Date: Wed, 1 May 2013 16:43:40 -0400
To: Rory Stark
<rory.stark@cruk.cam.ac.uk<mailto:rory.stark@cruk.cam.ac.uk>>
Subject: Diff Bind consultation
Dear Rory
I'm currently trying to draw a heatmap with your library using DNase
data. I can actually draw the heatmap but I cannot add the cathegories
bar you show in the DiffBind documentation example with the tamoxifen
data.
In fact I tried to draw the tamoxifen data heatmap using all the
examples from the documentation and I get it but without the upper
category colour bar, which is what I want. Is there an option for
this?
Thanks
Alejandra Medina
--
Alejandra Eugenia Medina Rivera.
SickKids
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