Hi, I am trying to extract the VIP (variable importance of projection) scores from PLS DA analysis in Bioconductor CMA package. Thanks for any advice -- output of sessionInfo(): > sessionInfo() R version 3.0.2 (2013-09-25) Platform: i386-w64-mingw32/i386 (32-bit) locale: [1] LC_COLLATE=Irish_Ireland.1252 LC_CTYPE=Irish_Ireland.1252 [3] LC_MONETARY=Irish_Ireland.1252 LC_NUMERIC=C [5] LC_TIME=Irish_Ireland.1252 attached base packages: [1] parallel stats graphics grDevices utils datasets methods base other attached packages: [1] impute_1.36.0 plsgenomics_1.2-6 MASS_7.3-29 CMA_1.20.0 [5] Biobase_2.22.0 BiocGenerics_0.8.0 BiocInstaller_1.12.0 loaded via a namespace (and not attached): [1] tools_3.0.2 -- Sent via the guest posting facility at bioconductor.org.