Entering edit mode
Jiantao Yu
▴
10
@jiantao-yu-6286
Last seen 10.3 years ago
Dear Sir/Madam,
When I used edgeR to do RNA-Seq analysis, I found the datasets of the
resulting DEGs generated by 'Classic' and 'GLM' methods are very
different,
the former contain ~460 DEGs, whereas the latter generate ~27,000
DEGs. I
don't know why this was happening. I attached the scripts and the
source
data I used, hope you would help me to explain this.
Joel
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"mu1.bam" "mu2.bam" "mu3.bam" "wt1.bam" "wt2.bam" "wt3.bam"
"AT1G01010" 50 89 54 69 71 56
"AT1G01020" 218 261 198 309 248 241
"AT1G01030" 27 47 26 50 48 23
"AT1G01040" 582 676 466 202 229 830
"AT1G01046" 10 11 8 6 6 5
"AT1G01050" 762 959 724 898 828 799
"AT1G01060" 174 217 157 335 304 221
"AT1G01070" 82 103 51 94 117 31
"AT1G01073" 0 0 0 1 0 0
"AT1G01080" 1075 1465 1086 1661 1468 878
"AT1G01090" 1910 1892 1537 1352 1223 2301
"AT1G01100" 2389 1994 1989 2260 1992 1496
"AT1G01110" 131 144 97 141 148 87
"AT1G01115" 0 0 0 0 0 0
"AT1G01120" 502 790 595 1149 761 754
"AT1G01130" 15 30 20 33 15 13
"AT1G01140" 893 1150 994 845 770 935
"AT1G01150" 3 0 1 2 0 2
"AT1G01160" 470 702 610 829 651 468
"AT1G01170" 813 1029 899 1450 1049 732
"AT1G01180" 150 262 226 41 40 176
"AT1G01183" 0 0 0 0 0 0
"AT1G01190" 56 42 57 62 76 40
"AT1G01200" 15 18 16 38 20 15
"AT1G01210" 101 100 98 156 113 94
"AT1G01220" 483 464 363 405 401 404
"AT1G01225" 39 45 31 74 50 39
"AT1G01230" 589 710 484 920 729 476
"AT1G01240" 818 1068 625 925 660 563
"AT1G01250" 10 20 12 10 9 7
"AT1G01260" 381 430 286 372 280 285
"AT1G01270" 0 0 0 0 0 0
"AT1G01280" 0 0 0 0 0 0
"AT1G01290" 146 185 154 217 178 128
"AT1G01300" 904 892 1082 1241 1509 1738
"AT1G01305" 0 0 0 0 0 0
"AT1G01310" 5 17 3 8 11 7
"AT1G01320" 7630 7301 5191 7533 6149 6492
"AT1G01340" 115 114 141 153 182 108
"AT1G01350" 320 433 367 477 444 248
"AT1G01355" 4 6 5 11 4 7
"AT1G01360" 166 192 123 170 135 134
"AT1G01370" 45 46 33 63 59 36
"AT1G01380" 10 7 5 9 7 2
"AT1G01390" 29 32 25 35 29 13
"AT1G01400" 0 0 0 0 0 0
"AT1G01410" 0 0 0 0 0 0
"AT1G01420" 44 94 64 66 70 49
"AT1G01430" 850 1154 960 999 976 954
"AT1G01440" 516 508 397 554 449 366
"AT1G01448" 205 274 154 154 144 214
"AT1G01450" 110 154 88 83 87 130
"AT1G01453" 0 1 0 0 0 0
"AT1G01460" 0 0 0 0 1 0
"AT1G01470" 1216 1875 1435 1425 1729 1025
"AT1G01471" 0 0 0 0 0 0
"AT1G01480" 5 3 3 19 6 24
"AT1G01490" 828 1356 762 706 573 469
"AT1G01500" 342 549 395 319 320 405
"AT1G01510" 630 738 511 799 771 575
"AT1G01520" 5 4 3 5 2 3
"AT1G01530" 0 0 2 0 0 0
"AT1G01540" 1159 1493 1187 1115 1146 987
"AT1G01550" 2720 4048 2767 4342 3564 2676
"AT1G01560" 44 101 58 62 73 39
"AT1G01570" 24 39 37 55 39 30
"AT1G01580" 29 23 16 37 24 21
"AT1G01590" 8 3 1 5 4 1
"AT1G01600" 48 83 42 21 27 47
"AT1G01610" 523 796 714 427 330 769
"AT1G01620" 5800 7083 4606 6528 5733 5041
"AT1G01630" 510 546 385 543 583 506
"AT1G01640" 35 63 29 55 32 31
"AT1G01650" 666 843 584 651 583 637
"AT1G01660" 12 28 22 9 10 13
"AT1G01670" 28 62 40 42 50 28
"AT1G01680" 5 14 5 5 3 10
"AT1G01690" 84 81 49 77 104 43
"AT1G01695" 8 7 4 6 9 4
"AT1G01700" 69 62 33 71 73 60
"AT1G01710" 597 720 598 768 747 565
"AT1G01720" 173 266 169 285 234 146
"AT1G01725" 118 136 90 160 126 84
"AT1G01730" 328 363 311 434 368 287
"AT1G01740" 179 191 162 251 217 200
"AT1G01750" 32 37 31 40 25 29
"AT1G01760" 103 121 77 123 120 69
"AT1G01770" 441 510 343 281 335 358
"AT1G01780" 145 165 146 119 110 112
"AT1G01790" 3555 3807 2972 3705 3662 2674
"AT1G01800" 757 918 682 991 886 706
"AT1G01810" 5 5 2 6 10 3
"AT1G01820" 779 1031 713 602 532 605
"AT1G01830" 223 286 217 182 159 273
"AT1G01840" 61 87 69 122 96 54
"AT1G01860" 275 339 255 504 356 227
"AT1G01870" 3 0 1 1 0 0
"AT1G01880" 49 41 34 37 32 42
"AT1G01890" 0 0 0 0 1 0
"AT1G01900" 220 208 155 278 292 149
"AT1G01910" 893 1034 786 1134 936 786
"AT1G01920" 225 323 201 269 275 219
"AT1G01930" 254 311 260 213 202 235
"AT1G01940" 169 187 167 149 168 108
"AT1G01950" 353 410 326 376 400 321
"AT1G01960" 2474 2322 1796 1920 1845 3277
"AT1G01970" 492 441 450 722 616 375
"AT1G01980" 0 0 0 0 1 0
"AT1G01990" 305 385 361 345 343 216
"AT1G02000" 128 199 168 191 188 131
"AT1G02010" 136 235 132 201 177 156
"AT1G02020" 103 61 43 78 63 146
"AT1G02030" 1 0 1 0 0 0
"AT1G02040" 1 1 1 0 0 2
"AT1G02050" 63 58 50 17 14 74
"AT1G02060" 79 128 91 24 27 119
"AT1G02065" 4 7 3 1 6 2
"AT1G02070" 4 11 2 4 9 4
"AT1G02074" 0 0 0 0 0 0
"AT1G02080" 3554 3646 2630 3568 3561 4045
"AT1G02090" 317 358 288 338 334 194
"AT1G02100" 481 579 405 544 443 389
"AT1G02110" 240 235 169 132 123 267
"AT1G02120" 688 979 677 424 410 763
"AT1G02130" 467 635 424 731 537 340
"AT1G02136" 0 3 0 0 0 0
"AT1G02140" 1196 1351 1080 1658 1545 1000
"AT1G02145" 367 472 347 498 411 312
"AT1G02150" 1568 1672 1333 926 820 1556
"AT1G02160" 155 191 165 55 41 127
"AT1G02170" 313 426 331 207 290 206
"AT1G02180" 84 79 76 87 89 61
"AT1G02190" 0 1 2 1 0 5
"AT1G02205" 1027 1333 704 2388 1586 985
"AT1G02210" 0 0 0 0 0 0
"AT1G02220" 48 78 37 130 76 63
"AT1G02228" 0 0 0 0 1 0
"AT1G02230" 16 37 8 28 28 11
"AT1G02250" 2 2 2 3 4 0
"AT1G02260" 269 361 275 418 315 248
"AT1G02270" 410 516 455 553 494 364
"AT1G02280" 1247 1237 975 1120 991 854
"AT1G02290" 219 262 148 180 221 175
"AT1G02300" 496 653 442 547 392 411
"AT1G02305" 1273 1778 1030 1157 931 956
"AT1G02310" 23 16 10 35 9 24
"AT1G02320" 2 7 1 1 3 1
"AT1G02330" 159 226 194 117 112 124
"AT1G02335" 120 236 148 179 194 132
"AT1G02340" 113 400 109 201 104 157
"AT1G02350" 63 69 31 102 77 66
"AT1G02360" 79 64 48 130 82 53
"AT1G02370" 135 163 135 140 117 129
"AT1G02380" 39 72 45 30 39 52
"AT1G02390" 25 44 17 44 18 20
"AT1G02391" 0 0 0 0 0 0
"AT1G02400" 47 147 158 122 110 77
"AT1G02405" 6 4 7 1 5 6
"AT1G02410" 247 303 265 323 301 204
"AT1G02420" 53 71 44 26 27 66
"AT1G02430" 21 42 33 19 21 45
"AT1G02440" 5 14 0 4 2 10
"AT1G02450" 8 8 8 10 18 7
"AT1G02460" 52 36 41 66 75 36
"AT1G02470" 17 43 19 113 17 38
"AT1G02475" 487 687 553 231 238 418
"AT1G02480" 0 0 0 0 0 1
"AT1G02490" 0 2 0 0 0 0
"AT1G02500" 3342 5256 3631 518 540 3242
"AT1G02510" 0 0 0 0 0 0
"AT1G02520" 9 9 6 7 10 8
"AT1G02530" 3 5 1 1 1 7
"AT1G02540" 0 0 0 0 0 0
"AT1G02550" 0 0 0 0 0 0
"AT1G02560" 4052 4479 3759 5163 4643 3435
"AT1G02570" 0 0 0 0 0 1
"AT1G02575" 0 0 0 0 0 0
"AT1G02580" 3 3 4 5 0 5
"AT1G02590" 2 4 2 3 5 3
"AT1G02600" 2 4 2 3 5 3
"AT1G02610" 885 1364 846 1152 881 624
"AT1G02620" 38 89 52 53 50 54
"AT1G02630" 22 33 5 24 24 7
"AT1G02640" 2334 2771 2670 1751 2532 3077
"AT1G02650" 37 52 47 53 61 50
"AT1G02660" 759 1218 932 416 519 794
"AT1G02670" 16 31 19 17 15 21
"AT1G02680" 176 219 167 176 165 128
"AT1G02681" 0 3 2 1 0 1
"AT1G02690" 159 147 103 171 187 113
"AT1G02700" 6 10 5 19 12 7
"AT1G02710" 0 0 0 4 4 0
"AT1G02720" 174 234 172 262 261 179
"AT1G02730" 606 605 378 544 575 323
"AT1G02740" 141 187 152 191 178 131
"AT1G02750" 169 227 165 301 210 128
"AT1G02760" 0 2 0 0 1 1
"AT1G02770" 5 3 2 2 3 1
"AT1G02780" 7450 7807 6241 9111 8120 5862
"AT1G02790" 0 0 0 0 0 0
"AT1G02800" 23 26 9 18 15 8
"AT1G02810" 8 0 10 9 8 11
"AT1G02813" 0 0 0 0 0 0
"AT1G02816" 162 203 148 195 179 146
"AT1G02820" 34 62 36 88 47 51
"AT1G02830" 0 0 0 0 0 0
"AT1G02840" 1160 1476 1139 552 677 794
"AT1G02850" 72 119 85 306 75 70
"AT1G02860" 421 546 447 658 556 493
"AT1G02870" 259 341 252 361 385 186
"AT1G02880" 190 256 206 313 265 164
"AT1G02890" 1712 1947 1753 1203 1487 2167
"AT1G02900" 18 32 35 30 28 21
"AT1G02910" 888 818 672 682 685 631
"AT1G02920" 713 1190 754 1426 682 550
"AT1G02930" 1181 1683 1449 2263 1366 784
"AT1G02940" 1 2 3 0 1 0
"AT1G02950" 90 139 84 120 142 65
"AT1G02952" 77 125 70 90 112 55
"AT1G02960" 351 414 344 386 354 373
"AT1G02965" 0 1 0 0 0 1
"AT1G02970" 49 47 30 39 47 30
"AT1G02980" 0 1 0 0 2 0
"AT1G02990" 478 566 348 296 247 373
"AT1G03000" 554 689 512 254 232 562
"AT1G03010" 85 159 95 98 144 75
"AT1G03020" 13 14 12 8 16 7
"AT1G03022" 0 0 0 0 0 0
"AT1G03030" 232 256 208 221 261 166
"AT1G03040" 452 589 441 691 658 376
"AT1G03050" 1 1 0 9 5 4
"AT1G03055" 28 35 11 43 51 31
"AT1G03060" 1743 1622 1283 881 1030 2114
"AT1G03070" 12 7 5 13 10 4
"AT1G03080" 1342 1429 977 830 820 1374
"AT1G03090" 1568 2445 1249 687 656 1156
"AT1G03100" 92 213 105 101 90 99
"AT1G03103" 0 0 0 0 1 0
"AT1G03106" 0 0 0 0 1 0
"AT1G03110" 228 226 244 332 374 173
"AT1G03120" 7 9 7 9 7 3
"AT1G03130" 14886 17215 13296 16749 15761 9193
"AT1G03140" 756 1095 752 1080 876 657
"AT1G03150" 278 399 242 460 349 202
"AT1G03160" 1519 1533 1283 1874 1577 1564
"AT1G03170" 3 4 7 4 10 2
"AT1G03180" 31 51 29 50 52 23
"AT1G03190" 193 229 155 210 184 169
"AT1G03200" 42 79 51 88 100 73
"AT1G03210" 239 339 239 325 355 181
"AT1G03220" 617 685 547 1520 669 1005
"AT1G03230" 408 427 381 591 407 378
"AT1G03240" 11 27 12 20 19 14
"AT1G03250" 311 452 359 519 526 363
"AT1G03260" 204 271 197 248 274 184
"AT1G03270" 82 78 72 86 62 47
"AT1G03280" 199 256 182 141 131 220
"AT1G03290" 651 942 570 876 741 452
"AT1G03300" 76 100 86 58 72 62
"AT1G03310" 770 816 610 956 762 695
"AT1G03320" 4 1 5 8 5 3
"AT1G03330" 283 322 263 374 288 196
"AT1G03340" 46 51 32 75 45 42
"AT1G03350" 482 772 512 641 588 510
"AT1G03360" 153 147 103 167 176 112
"AT1G03365" 263 412 294 335 277 279
"AT1G03370" 661 840 586 456 503 597
"AT1G03380" 1096 1316 819 867 825 842
"AT1G03390" 4 23 10 10 14 8
"AT1G03400" 443 673 427 511 600 363
"AT1G03410" 440 579 432 310 341 348
"AT1G03420" 383 508 387 249 284 312
"AT1G03430" 194 292 192 208 230 138
"AT1G03440" 213 273 175 200 184 213
"AT1G03445" 1 0 1 1 1 0
"AT1G03457" 68 77 57 67 76 55
"AT1G03470" 32 30 22 18 15 23
"AT1G03475" 2309 2927 2409 2697 2622 1381
"AT1G03490" 0 1 0 0 0 1
"AT1G03495" 88 126 118 101 80 89
"AT1G03502" 32 48 41 73 74 37
"AT1G03506" 10 44 29 55 60 19
"AT1G03510" 22 31 15 20 15 13
"AT1G03515" 0 0 0 0 0 0
"AT1G03520" 257 358 239 280 202 250
"AT1G03530" 99 120 110 56 75 121
"AT1G03540" 34 27 19 17 12 26
"AT1G03545" 130 200 122 165 162 128
"AT1G03550" 169 257 147 212 208 160
"AT1G03560" 47 78 66 28 30 99
"AT1G03570" 0 2 0 0 0 1
"AT1G03580" 84 294 113 155 108 145
"AT1G03590" 340 479 359 347 308 281
"AT1G03600" 5248 5153 4946 8574 6594 4577
"AT1G03610" 861 1485 701 1029 750 687
"AT1G03620" 12 25 22 25 17 13
"AT1G03630" 2910 3017 2502 4723 3752 2260
"AT1G03640" 0 0 0 0 0 1
"AT1G03650" 45 73 58 73 57 44
"AT1G03660" 1 5 5 3 3 2
"AT1G03670" 0 1 0 3 0 1
"AT1G03680" 4113 5802 4497 5885 5296 4840
"AT1G03687" 173 181 144 215 235 161
"AT1G03700" 0 0 0 0 0 0
"AT1G03710" 5 6 2 5 2 1
"AT1G03720" 0 0 0 0 0 0
"AT1G03730" 142 213 170 204 140 106
"AT1G03740" 1525 2495 1700 1543 1399 1170
"AT1G03743" 21 18 26 55 31 15
"AT1G03746" 16 24 9 41 15 11
"AT1G03750" 192 241 158 203 152 141
"AT1G03760" 151 215 139 137 144 125
"AT1G03770" 70 74 59 49 61 92
"AT1G03780" 140 170 120 165 200 113
"AT1G03790" 2 0 0 2 0 10
"AT1G03800" 2 6 0 0 0 1
"AT1G03810" 0 0 0 0 0 0
"AT1G03820" 55 86 63 199 92 34
"AT1G03830" 124 64 87 56 64 143
"AT1G03840" 13 5 5 8 10 4
"AT1G03850" 47 84 33 75 21 25
"AT1G03860" 847 964 776 1237 1082 715
"AT1G03870" 1173 1875 1888 1404 2068 1485
"AT1G03880" 0 0 0 0 0 0
"AT1G03890" 0 0 0 0 0 0
"AT1G03900" 936 1068 915 1215 1266 727
"AT1G03905" 26 34 20 38 29 28
"AT1G03910" 463 532 427 226 235 442
"AT1G03920" 18 21 16 23 27 17
"AT1G03930" 1165 1495 1220 1698 1548 977
"AT1G03935" 17 77 63 85 78 39
"AT1G03940" 81 103 92 69 64 84
"AT1G03950" 156 210 131 93 83 83
"AT1G03960" 205 212 157 291 253 198
"AT1G03970" 275 353 267 232 263 219
"AT1G03980" 168 208 168 164 144 70
"AT1G03982" 0 0 0 0 0 0
"AT1G03990" 21 12 8 10 5 48
"AT1G04000" 104 123 100 130 108 149
"AT1G04010" 123 177 122 100 113 116
"AT1G04020" 147 138 126 68 88 89
"AT1G04030" 448 697 663 750 715 562
"AT1G04040" 1085 1468 1368 1702 1670 1441
"AT1G04050" 28 33 24 20 26 39
"AT1G04070" 60 56 67 98 86 82
"AT1G04080" 1221 1472 1054 1205 1132 1260
"AT1G04090" 23 11 16 13 15 24
"AT1G04100" 80 127 95 86 98 87
"AT1G04110" 197 194 150 267 189 88
"AT1G04120" 1043 985 877 922 964 828
"AT1G04130" 107 122 87 183 131 92
"AT1G04140" 1741 2185 1624 1143 1454 1645
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"AT1G04240" 717 1107 748 580 672 606
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"AT1G04270" 4475 4167 3631 6781 5699 2866
"AT1G04280" 361 543 382 218 218 300
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"AT1G04300" 1392 2047 1369 1487 1481 973
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"AT1G04370" 0 0 0 0 0 0
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"AT1G04410" 11875 12385 10132 16213 13372 11168
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"AT1G04440" 1329 1923 1356 2109 1648 1241
"AT1G04445" 1 1 0 2 0 0
"AT1G04450" 0 0 0 0 0 0
"AT1G04457" 0 0 0 0 0 1
"AT1G04470" 0 0 0 0 0 0
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"AT1G04500" 3 2 6 5 3 2
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"AT1G04520" 136 141 139 281 234 129
"AT1G04530" 420 420 374 299 263 312
"AT1G04540" 61 66 56 52 78 55
"AT1G04550" 181 189 134 72 56 76
"AT1G04555" 100 175 100 143 147 92
"AT1G04560" 0 0 0 0 0 0
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"AT1G04580" 0 10 0 27 4 11
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"AT1G04670" 0 0 0 1 0 0
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"AT1G04750" 1104 1414 1026 1727 1412 880
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"AT1G04810" 937 1066 747 404 464 869
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"AT1G04930" 60 57 63 68 58 57
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"AT1G04970" 475 588 435 778 616 365
"AT1G04980" 92 77 67 82 95 60
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"AT1G04990" 423 641 454 390 449 396
"AT1G05000" 51 57 52 91 58 56
"AT1G05010" 4558 5236 5074 7286 7292 5726
"AT1G05020" 49 96 70 100 101 100
"AT1G05030" 249 291 268 283 266 252
"AT1G05040" 1 0 0 0 1 0
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"AT1G05060" 192 227 169 254 197 158
"AT1G05061" 7 8 6 10 14 1
"AT1G05065" 18 16 14 33 25 19
"AT1G05070" 315 354 272 396 412 258
"AT1G05080" 0 0 0 0 0 0
"AT1G05085" 6 3 0 0 0 2
"AT1G05090" 697 850 597 785 714 607
"AT1G05100" 8 12 11 7 8 10
"AT1G05120" 252 278 192 139 148 227
"AT1G05135" 23 20 18 18 17 78
"AT1G05136" 0 0 0 0 0 0
"AT1G05140" 737 819 659 747 652 545
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"AT1G05160" 253 289 235 385 296 198
"AT1G05170" 168 192 127 175 133 105
"AT1G05180" 505 584 459 511 491 400
"AT1G05190" 5695 6607 5338 5933 5635 3231
"AT1G05200" 996 1164 925 715 740 950
"AT1G05205" 154 177 138 178 153 127
"AT1G05210" 89 81 50 111 103 43
"AT1G05220" 35 39 34 25 19 48
"AT1G05230" 197 309 193 112 127 238
"AT1G05240" 4 2 0 2 1 6
"AT1G05250" 3 2 0 2 1 6
"AT1G05260" 1 0 1 0 1 0
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"AT1G05280" 0 0 0 0 0 0
"AT1G05290" 0 0 0 0 0 0
"AT1G05291" 0 0 0 0 0 0
"AT1G05300" 98 169 99 99 75 79
"AT1G05310" 53 112 63 101 83 66
"AT1G05320" 368 448 320 284 252 325
"AT1G05330" 0 0 0 3 1 0
"AT1G05340" 42 79 40 105 40 79
"AT1G05350" 305 415 274 251 261 311
"AT1G05360" 213 202 176 332 254 130
"AT1G05370" 18 33 17 26 17 15
"AT1G05380" 480 584 395 256 263 595
"AT1G05385" 469 484 415 678 520 342
"AT1G05390" 0 0 0 0 0 0
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"ATCG00550" 59509 60151 63963 30247 29557 21778
"ATCG00560" 65567 104700 91726 44854 48512 58755
"ATCG00570" 65668 102931 82867 42528 48395 58811
"ATCG00580" 122933 189836 152004 81365 91456 116655
"ATCG00590" 9802 13076 3656 13788 1955 3978
"ATCG00600" 10156 12939 7233 13406 7944 7500
"ATCG00610" 4291 6422 4345 6214 5843 4812
"ATCG00620" 5848 9304 6762 8434 8725 7981
"ATCG00630" 55494 39391 39591 42186 35172 20885
"ATCG00640" 20576 28919 21872 24674 25896 19394
"ATCG00650" 13332 20765 12477 18964 12123 16148
"ATCG00660" 7935 11153 9380 5545 5920 3311
"ATCG00670" 92985 104329 89406 122861 112838 63580
"ATCG00680" 453669 544481 412940 198413 260726 311391
"ATCG00690" 13024 24758 13034 9115 9141 10123
"ATCG00700" 22952 12797 10770 8618 11149 10213
"ATCG00710" 58242 43643 41687 28772 33344 43486
"ATCG00720" 235738 255818 184584 134076 135782 194851
"ATCG00730" 209687 258976 207841 118539 121972 166293
"ATCG00740" 32874 42910 32597 36013 35948 28792
"ATCG00750" 19792 21127 17924 20026 20842 16353
"ATCG00760" 6645 8292 7421 8273 8344 4732
"ATCG00770" 16521 19822 17410 17261 20297 12852
"ATCG00780" 25360 27885 22600 26739 25162 16972
"ATCG00790" 56093 63060 47034 50996 48054 32006
"ATCG00800" 30540 28618 24192 27084 28475 24113
"ATCG00810" 16832 16661 13828 13795 14589 12279
"ATCG00820" 9074 10190 9111 6865 8076 7702
"ATCG00830" 58481 67995 55965 37252 44043 41343
"ATCG00840" 11362 10529 7600 6202 7022 6938
"ATCG00850" 884 712 701 972 1105 711
"ATCG00860" 90036 94078 83407 94116 97965 78515
"ATCG00870" 1685 2594 2093 2790 3018 1605
"ATCG00880" 243 846 1044 1290 1903 632
"ATCG00890" 106170 125614 105649 102570 101316 81998
"ATCG00900" 7030 8180 8114 7466 8386 6185
"ATCG00905" 24898 29389 25772 23215 23805 14796
"ATCG00910" 392 220 211 348 545 3
"ATCG00920" 22299 1565 3212 1974 2459 9
"ATCG00930" 246790 205987 222659 205626 237380 122420
"ATCG00940" 145001 114630 110664 39150 50888 178446
"ATCG00950" 3345 14 0 0 0 2
"ATCG00960" 3345 14 0 0 0 2
"ATCG00970" 3345 14 4 2 0 5
"ATCG00980" 3349 18 4 2 4 6
"ATCG00990" 4864 1223 1967 1832 2357 1267
"ATCG01000" 49415 64016 46907 71741 64514 40931
"ATCG01010" 47060 64614 33052 66759 38228 27574
"ATCG01020" 26789 27113 19054 38820 21296 15627
"ATCG01030" 3769 77 54 97 75 65
"ATCG01040" 18206 21435 13256 15844 13725 6274
"ATCG01050" 110287 137608 102430 147996 114999 78115
"ATCG01060" 62821 70496 54578 102668 70884 55593
"ATCG01070" 38534 38636 27377 45710 34371 26311
"ATCG01080" 44819 53123 37966 61588 46638 26007
"ATCG01090" 29074 33458 22560 38728 27712 20034
"ATCG01100" 115117 136016 101016 165540 122509 74409
"ATCG01110" 23182 19479 16010 18262 15619 12508
"ATCG01120" 6865 3275 2560 2295 2076 1525
"ATCG01130" 81370 103350 74498 107551 86036 64886
"ATCG01140" 4864 1209 1967 1832 2357 1267
"ATCG01150" 3349 4 4 2 4 6
"ATCG01160" 3345 0 4 2 0 5
"ATCG01170" 3345 0 0 0 0 2
"ATCG01180" 3345 0 0 0 0 2
"ATCG01190" 145001 114617 110664 39150 50888 178446
"ATCG01200" 246790 205974 222659 205626 237265 122420
"ATCG01210" 22299 1552 3212 1974 2308 9
"ATCG01220" 392 207 211 348 394 3
"ATCG01230" 24898 29376 25772 23215 23654 14796
"ATCG01240" 7030 8167 8114 7466 8235 6185
"ATCG01250" 106170 125601 105649 102570 101165 81998
"ATCG01260" 243 833 1044 1290 1752 632
"ATCG01270" 1685 2581 2093 2790 2867 1605
"ATCG01280" 90036 94065 83407 94110 97813 78515
"ATCG01290" 884 699 701 966 953 711
"ATCG01300" 11362 10516 7600 6196 6870 6938
"ATCG01310" 58481 67982 55965 37246 43891 41343
"ATMG00010" 31 36 29 32 30 25
"ATMG00020" 1 2 0 0 0 0
"ATMG00030" 33 30 23 40 43 14
"ATMG00040" 7485 6891 5382 6749 7447 3477
"ATMG00050" 370 374 338 183 186 582
"ATMG00060" 12638 14780 11626 14719 12643 12154
"ATMG00070" 7104 8443 6625 9151 7350 7643
"ATMG00080" 3412 4398 2926 770 905 2696
"ATMG00090" 10566 11501 8555 3492 4328 10589
"ATMG00100" 68 29 21 41 33 42
"ATMG00110" 876 1126 755 1181 810 677
"ATMG00120" 46 29 20 30 38 36
"ATMG00130" 79 73 65 75 80 80
"ATMG00140" 100 80 67 95 78 101
"ATMG00150" 66 50 26 51 55 26
"ATMG00160" 17654 21014 15910 25257 21039 14112
"ATMG00170" 94 117 107 121 131 92
"ATMG00180" 5094 6337 5209 4395 3791 4251
"ATMG00190" 71 61 66 60 71 78
"ATMG00200" 210 182 160 62 111 257
"ATMG00210" 2313 3287 2206 437 700 2372
"ATMG00220" 17631 20805 15040 16618 15941 14709
"ATMG00230" 10 5 7 1 14 15
"ATMG00240" 20 21 15 14 15 11
"ATMG00250" 22 14 19 11 17 17
"ATMG00260" 69 63 48 51 62 58
"ATMG00270" 9512 12607 10944 13130 10885 6755
"ATMG00280" 333799 363804 274831 246772 258495 353364
"ATMG00285" 4096 4423 3699 3654 3399 3152
"ATMG00290" 2608 2501 1954 962 1225 1960
"ATMG00300" 222 206 150 108 113 154
"ATMG00310" 163 148 102 73 68 95
"ATMG00320" 140 115 87 60 59 86
"ATMG00330" 179 226 520 409 1063 245
"ATMG00340" 58 25 30 28 28 45
"ATMG00350" 70 34 45 18 25 36
"ATMG00360" 127 82 98 110 130 72
"ATMG00370" 6611 7499 5512 7689 7741 5513
"ATMG00380" 284 238 406 440 524 346
"ATMG00390" 76 25 49 3 9 37
"ATMG00400" 720 681 536 402 428 497
"ATMG00410" 34401 38386 28834 41192 33932 26722
"ATMG00420" 220 257 242 368 174 168
"ATMG00430" 85 63 71 26 49 91
"ATMG00440" 103 75 57 31 39 69
"ATMG00450" 86 80 56 30 53 69
"ATMG00460" 65 40 39 18 29 40
"ATMG00470" 55 37 38 11 20 51
"ATMG00480" 14094 14814 13555 19226 17094 11410
"ATMG00490" 764 632 539 361 404 1251
"ATMG00500" 1104 1054 816 480 512 1549
"ATMG00510" 12383 14277 9559 7639 7183 13717
"ATMG00513" 13646 14091 10181 10177 9394 9650
"ATMG00516" 16626 16764 14015 7356 8393 13737
"ATMG00520" 5771 6363 4926 1946 2735 5345
"ATMG00530" 200 124 110 31 47 152
"ATMG00540" 65 50 41 32 23 82
"ATMG00550" 52 45 23 7 17 36
"ATMG00560" 5252 5388 4537 4326 4910 3926
"ATMG00570" 1511 1670 1226 1955 1670 1165
"ATMG00580" 27248 31715 25702 27916 25520 21616
"ATMG00590" 1870 2121 1816 1740 1583 1550
"ATMG00600" 97 103 39 37 55 54
"ATMG00610" 615 454 422 542 514 469
"ATMG00620" 124 140 125 124 136 112
"ATMG00630" 59 66 44 44 39 56
"ATMG00640" 3385 4479 3326 533 728 4893
"ATMG00650" 2808 3526 2311 1132 915 2870
"ATMG00660" 1591 1723 1565 236 473 2047
"ATMG00665" 130 101 102 51 87 118
"ATMG00670" 1174 1003 941 795 888 1225
"ATMG00680" 44 31 26 6 11 44
"ATMG00690" 3032 2641 2611 2264 2382 2349
"ATMG00700" 86 51 37 46 31 64
"ATMG00710" 72 74 48 17 19 70
"ATMG00720" 41 34 27 11 16 37
"ATMG00730" 15760 19214 14282 15065 16727 12219
"ATMG00740" 67 54 51 38 29 56
"ATMG00750" 58 44 35 20 20 43
"ATMG00760" 70 48 40 38 28 55
"ATMG00770" 56 40 29 25 23 41
"ATMG00780" 151 236 520 414 1065 242
"ATMG00790" 57 38 30 34 31 43
"ATMG00800" 37 22 19 7 7 26
"ATMG00810" 350 311 302 289 298 308
"ATMG00820" 144 124 97 53 73 116
"ATMG00830" 983 1047 931 175 287 1080
"ATMG00840" 52 38 27 7 14 42
"ATMG00850" 44 30 27 11 9 58
"ATMG00860" 47 31 25 12 14 40
"ATMG00870" 65 47 34 18 16 64
"ATMG00880" 62 40 36 13 16 54
"ATMG00890" 58 43 36 31 29 55
"ATMG00900" 565 864 479 377 303 754
"ATMG00910" 94 92 59 35 38 158
"ATMG00920" 460 535 427 654 519 371
"ATMG00930" 1588 2527 1628 2777 2231 2256
"ATMG00940" 99 123 59 59 70 67
"ATMG00950" 50 31 23 21 17 34
"ATMG00960" 593 759 638 62 59 577
"ATMG00970" 230 213 140 62 65 168
"ATMG00980" 731 972 714 314 383 452
"ATMG00990" 807 939 722 389 464 650
"ATMG01000" 633 559 605 263 263 563
"ATMG01010" 478 309 365 158 145 430
"ATMG01020" 551 366 330 187 151 463
"ATMG01030" 93 74 70 49 50 78
"ATMG01040" 176 278 212 117 111 312
"ATMG01050" 137 132 98 84 90 96
"ATMG01060" 128 60 133 79 185 82
"ATMG01070" 101 41 112 48 148 61
"ATMG01080" 27518 20621 19316 23453 25647 14677
"ATMG01090" 1578 1702 1505 796 815 2849
"ATMG01100" 63 35 35 11 16 45
"ATMG01110" 138 92 104 114 106 132
"ATMG01120" 3125 2990 2683 691 612 2673
"ATMG01130" 1355 1445 1284 35 45 1803
"ATMG01140" 72 55 39 25 28 45
"ATMG01150" 54 43 53 20 38 67
"ATMG01160" 358 469 432 792 345 297
"ATMG01170" 24381 28846 22442 33361 27146 20181
"ATMG01180" 36 17 16 7 6 27
"ATMG01190" 52384 59850 45512 42023 47336 46616
"ATMG01200" 7668 7039 6000 4898 5918 6472
"ATMG01210" 320 514 376 536 451 423
"ATMG01220" 481 622 468 630 699 494
"ATMG01230" 75 57 34 35 39 49
"ATMG01240" 46 38 42 25 20 31
"ATMG01250" 43 49 27 28 21 31
"ATMG01260" 73 99 69 33 37 49
"ATMG01270" 344 477 334 35 53 410
"ATMG01275" 1414 1641 1297 1076 862 1777
"ATMG01280" 5275 5763 5211 6820 6359 6493
"ATMG01290" 26 27 29 23 16 25
"ATMG01300" 21 19 8 6 4 23
"ATMG01310" 12 16 11 10 10 19
"ATMG01320" 11827 14464 11211 9855 9549 11458
"ATMG01330" 699 866 734 548 499 866
"ATMG01340" 17 21 16 13 12 19
"ATMG01350" 302 368 323 243 286 222
"ATMG01360" 40177 47605 37614 56036 49521 34581
"ATMG01370" 60 26 26 42 21 275
"ATMG01380" 11 20 25 28 40 16
"ATMG01390" 4524 1728 1696 2174 2737 10435
"ATMG01400" 7 13 11 10 9 15
"ATMG01410" 45 41 37 52 46 31