Hi, I try to install tcltk for the package "qvalue". I have already done as following: sudo apt-get install tcl tk sudo apt-get install tcl-dev tk-dev sudo apt-get install r-cran-rcmdr But > capabilities()["tcltk"] tcltk FALSE It seems tcltk has not installed. Any suggestions are welcome! Best, Liyue -- output of sessionInfo(): > sessionInfo() R version 3.0.2 (2013-09-25) Platform: x86_64-unknown-linux-gnu (64-bit) locale: [1] LC_CTYPE=zh_CN.UTF-8 LC_NUMERIC=C [3] LC_TIME=zh_CN.UTF-8 LC_COLLATE=zh_CN.UTF-8 [5] LC_MONETARY=zh_CN.UTF-8 LC_MESSAGES=zh_CN.UTF-8 [7] LC_PAPER=zh_CN.UTF-8 LC_NAME=C [9] LC_ADDRESS=C LC_TELEPHONE=C [11] LC_MEASUREMENT=zh_CN.UTF-8 LC_IDENTIFICATION=C attached base packages: [1] stats graphics grDevices utils datasets methods base other attached packages: [1] BiocInstaller_1.12.0 loaded via a namespace (and not attached): [1] tools_3.0.2 -- Sent via the guest posting facility at bioconductor.org.

How did you install R? Did you compile or did you use apt-get? If you compiled, you will need to recompile, as tcltk is part of the base install and won't be built unless the tk and tcl headers are found. Best, Jim On 1/2/2014 8:10 AM, liyue [guest] wrote: > Hi, > > I try to install tcltk for the package "qvalue". > > I have already done as following: > > sudo apt-get install tcl tk > sudo apt-get install tcl-dev tk-dev > sudo apt-get install r-cran-rcmdr > > But >> capabilities()["tcltk"] > tcltk > FALSE > > It seems tcltk has not installed. > > Any suggestions are welcome! > > Best, > > Liyue > > > > > > > > -- output of sessionInfo(): > >> sessionInfo() > R version 3.0.2 (2013-09-25) > Platform: x86_64-unknown-linux-gnu (64-bit) > > locale: > [1] LC_CTYPE=zh_CN.UTF-8 LC_NUMERIC=C > [3] LC_TIME=zh_CN.UTF-8 LC_COLLATE=zh_CN.UTF-8 > [5] LC_MONETARY=zh_CN.UTF-8 LC_MESSAGES=zh_CN.UTF-8 > [7] LC_PAPER=zh_CN.UTF-8 LC_NAME=C > [9] LC_ADDRESS=C LC_TELEPHONE=C > [11] LC_MEASUREMENT=zh_CN.UTF-8 LC_IDENTIFICATION=C > > attached base packages: > [1] stats graphics grDevices utils datasets methods base > > other attached packages: > [1] BiocInstaller_1.12.0 > > loaded via a namespace (and not attached): > [1] tools_3.0.2 > > > -- > Sent via the guest posting facility at bioconductor.org. > > _______________________________________________ > Bioconductor mailing list > Bioconductor at r-project.org > https://stat.ethz.ch/mailman/listinfo/bioconductor > Search the archives: http://news.gmane.org/gmane.science.biology.informatics.conductor -- James W. MacDonald, M.S. Biostatistician University of Washington Environmental and Occupational Health Sciences 4225 Roosevelt Way NE, # 100 Seattle WA 98105-6099