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Jerry Cholo
▴
190
@jerry-cholo-6218
Last seen 10.2 years ago
Hello,
I would like to have expression data for GSE27597. When I ran
following
command line:
data1 = getGEO("GSE27597")
I noticed that there are two files related to this GSE (see below):
Found 2 file(s)
GSE27597-GPL13243_series_matrix.txt.gz
Using locally cached version:
C:\Users\AppData\Local\Temp\RtmpodgO6C/GSE27597-GPL13243_series_matrix
.txt.gz
Using locally cached version of GPL13243 found here:
C:\Users\AppData\Local\Temp\RtmpodgO6C/GPL13243.soft
GSE27597-GPL5175_series_matrix.txt.gz
Using locally cached version:
C:\Users\AppData\Local\Temp\RtmpodgO6C/GSE27597-GPL5175_series_matrix.
txt.gz
Using locally cached version of GPL5175 found here:
C:\Users\AppData\Local\Temp\RtmpodgO6C/GPL5175.soft
When I ran following line
datExpr = exprs (data1)
to get expression data I did not get the main data that includes more
samples, but I got the smaller dataset that has few samples.
May someone let me know how I could deal with this problem?
Thanks,
Jerry
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