Entering edit mode
Anitha Sundararajan
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140
@anitha-sundararajan-6152
Last seen 10.3 years ago
Hello-
Has anyone seen the following error before with DEXSeq? I have run
the
tool a couple times before with no issues.
So when I try to run the "fitDispersionFunction", I get the following:
*no CR dispersion estimations found, please first call
estimateDispersions function*
I actually ran the estimateDispersions function prior to this without
any problem.
Thanks so much for your help.
Anitha
=====================================================
> sessionInfo()
R version 3.0.2 (2013-09-25)
Platform: x86_64-unknown-linux-gnu (64-bit)
locale:
[1] LC_CTYPE=en_US.UTF-8 LC_NUMERIC=C
[3] LC_TIME=en_US.UTF-8 LC_COLLATE=en_US.UTF-8
[5] LC_MONETARY=en_US.UTF-8 LC_MESSAGES=en_US.UTF-8
[7] LC_PAPER=en_US.UTF-8 LC_NAME=C
[9] LC_ADDRESS=C LC_TELEPHONE=C
[11] LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C
attached base packages:
[1] parallel stats graphics grDevices utils datasets methods
[8] base
other attached packages:
[1] DEXSeq_1.8.0 Biobase_2.22.0 BiocGenerics_0.8.0
[4] BiocInstaller_1.12.1
loaded via a namespace (and not attached):
[1] biomaRt_2.18.0 Biostrings_2.30.1 bitops_1.0-6
[4] GenomicRanges_1.14.4 hwriter_1.3 IRanges_1.20.7
[7] RCurl_1.95-4.1 Rsamtools_1.14.3 statmod_1.4.20
[10] stats4_3.0.2 stringr_0.6.2 tools_3.0.2
[13] XML_3.98-1.1 XVector_0.2.0 zlibbioc_1.8.0
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