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upendra kumar devisetty
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30
@upendra-kumar-devisetty-5614
Last seen 10.2 years ago
Hi,
I have been trying to generate GO category table for Chinese hamster
genome using getgo function in goseq package. Even though chinese
hamster is said to be included in the supportedGenomes() function of
goseq, i am having trouble generating the GO category table. Does
anybody have experience do this.
Here is what i have trying without much success...
genes <- c("EGV95676", "EGW04231", "EGV99641") # example gene list
getgo(genes, "criGri1", "ensGene")
And i get this error -
Error in library(paste(orgstring, "db", sep = "."), character.only =
TRUE) :
there is no package called ?NA.db?
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Upendra Kumar Devisetty, Ph.D
Postdoctoral Scholar
Dept. of Plant Biology, UC Davis
Davis, CA 95616
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