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Simon Lin
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@simon-lin-461
Last seen 10.2 years ago
Hope the following information is useful for people on this mailing
list!
This workshop will focus on re-analyzing of the malaria array data set
from
DeRisi lab. -Simon
Day 1
Presenter 1: Joseph Beyene, Chromosomal Clustering of Periodically
Expressed
Genes in Plasmodium Falciparum
Presenter 2: Rudy Guerra, Spatial Correlation of Expression in
P.falciparum
Presenter 3: Aidan Peterson, Linking Gene Expression Patterns and
Transcription Regulation in Plasmodium Falciparum
Presenter 4: Giri Narasimhan, Mining Regulatory Elements in the
Plasmodium
falciparum Genome Using Gene Expression Data
Presenter 5: Earl Glynn, Searching for Periodic Gene Expression
Patterns
Using Lomb-Scargle Periodograms
Presenter 6: Ivanno Azzini, Simple Methods for Peak Detection in Time
Series
Microarray Data
Day 2:
Presenter 1: Raya Khanin, Construction of Malaria Gene Expression
Network
Using Partial Correlations
Presenter 2: Hernando del Portillo, A New Annotation Tool for Malaria
Based
on Inference of Probabilistic Genetic Networks
Presenter 3: Jay Snoddy, Detecting Network Motifs in Gene Co-
expression
Networks
Presenter 4: Galina Glazko, The Use of Generalized Expression Profiles
for
Prediction of Proteins Related to Merozoite Invasion
Presenter 5: Rudy Guerra, Oxidative Stress Genes in Plasmodium
falciparum as
Indicated by Temporal Gene Expression
Presenter 6: Hongyu Zhao, Identifying Stage Specific Genes by
Combining
Information from Two Types of Oligonucleotide Arrays
Info at
www.camda.duke.edu/camda04
=================================================
Simon M. Lin, M.D.
Manager, Duke Bioinformatics Shared Resource
Assistant Research Professor, Biostatistics and Bioinformatics
Box 3958, Duke University Medical Center
Rm 286 Hanes, Trent Dr, Durham, NC 27710
Ph: (919) 681-9646 FAX: (919) 681-8028
Lin00025 (at) mc.duke.edu
http://dbsr.duke.edu