split.AffyBatch()

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Wenbin Liu ▴ 100

@wenbin-liu-943

Last seen 10.3 years ago

Hi there! It appears that the function split.AffyBatch was removed from affy. It used to work well sometimes and work bad other times. I'm not sure mine is the latest version of affy although I assume it updates automatically when library(affy) is executed. Any ideas? Thanks. Wenbin

affy affy • 912 views

ADD COMMENT • link updated 20.2 years ago by Rafael A. Irizarry ★ 2.3k • written 20.2 years ago by Wenbin Liu ▴ 100

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Rafael A. Irizarry ★ 2.3k

@rafael-a-irizarry-205

Last seen 10.3 years ago

you can now use the split method. instead of "split.AffyBatch" simply type "split" On Wed, 6 Oct 2004, Wenbin Liu wrote: > Hi there! It appears that the function split.AffyBatch > was removed from affy. It used to work well sometimes > and work bad other times. I'm not sure mine is the > latest version of affy although I assume it updates > automatically when library(affy) is executed. Any > ideas? > > Thanks. > > Wenbin > > _______________________________________________ > Bioconductor mailing list > Bioconductor@stat.math.ethz.ch > https://stat.ethz.ch/mailman/listinfo/bioconductor >

ADD COMMENT • link 20.2 years ago Rafael A. Irizarry ★ 2.3k

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Also note that loading the affy package does *not* automatically update the package. To do that you need to use reposTools. library(reposTools) update.packages2("affy") Jim Rafael A. Irizarry wrote: > you can now use the split method. > > instead of "split.AffyBatch" simply type "split" > > On Wed, 6 Oct 2004, Wenbin Liu wrote: > > >>Hi there! It appears that the function split.AffyBatch >>was removed from affy. It used to work well sometimes >>and work bad other times. I'm not sure mine is the >>latest version of affy although I assume it updates >>automatically when library(affy) is executed. Any >>ideas? >> >>Thanks. >> >>Wenbin >> >>_______________________________________________ >>Bioconductor mailing list >>Bioconductor@stat.math.ethz.ch >>https://stat.ethz.ch/mailman/listinfo/bioconductor >> > > > _______________________________________________ > Bioconductor mailing list > Bioconductor@stat.math.ethz.ch > https://stat.ethz.ch/mailman/listinfo/bioconductor -- James W. MacDonald Affymetrix and cDNA Microarray Core University of Michigan Cancer Center 1500 E. Medical Center Drive 7410 CCGC Ann Arbor MI 48109

ADD REPLY • link 20.2 years ago James W. MacDonald 67k

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Thanks a lot, Jim and Rafael! wenbin --- "James W. MacDonald" <jmacdon@med.umich.edu> wrote: > Also note that loading the affy package does *not* > automatically update > the package. To do that you need to use reposTools. > > library(reposTools) > update.packages2("affy") > > Jim > > > > Rafael A. Irizarry wrote: > > > you can now use the split method. > > > > instead of "split.AffyBatch" simply type "split" > > > > On Wed, 6 Oct 2004, Wenbin Liu wrote: > > > > > >>Hi there! It appears that the function > split.AffyBatch > >>was removed from affy. It used to work well > sometimes > >>and work bad other times. I'm not sure mine is the > >>latest version of affy although I assume it > updates > >>automatically when library(affy) is executed. Any > >>ideas? > >> > >>Thanks. > >> > >>Wenbin > >> > >>_______________________________________________ > >>Bioconductor mailing list > >>Bioconductor@stat.math.ethz.ch > >>https://stat.ethz.ch/mailman/listinfo/bioconductor > >> > > > > > > _______________________________________________ > > Bioconductor mailing list > > Bioconductor@stat.math.ethz.ch > > https://stat.ethz.ch/mailman/listinfo/bioconductor > > > -- > James W. MacDonald > Affymetrix and cDNA Microarray Core > University of Michigan Cancer Center > 1500 E. Medical Center Drive > 7410 CCGC > Ann Arbor MI 48109 >

ADD REPLY • link 20.2 years ago Wenbin Liu ▴ 100

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