error in sourcing biocLite: Error in get(".BioC_version_associated_with_R

error in sourcing biocLite: Error in get(".BioC_version_associated_with_R_version", envir = asNamespace("tools")

0

Entering edit mode

melanie.shook • 0

@melanieshook-7592

Last seen 9.7 years ago

United States

I'm using R version 3.1.3 (smooth sidewalk) in Mac OSX Yosemite. When I enter the command:

I get the following error:

Error in get(".BioC_version_associated_with_R_version", envir = asNamespace("tools"), :

unused arguments (".BioC_version_associated_with_R_version", envir = asNamespace("tools"), inherits = FALSE)

I was unable to find anything by searching the forums or reading the installation page. Does anyone know what is causing this error?

Thanks for any help.

bioclite • 1.7k views

ADD COMMENT • link 9.7 years ago melanie.shook • 0

1

Entering edit mode

I wonder if you have another package loaded that is masking base::get(). Try starting R with:

R --vanilla

And then sourcing biocLite.R; does that work?

ADD REPLY • link 9.7 years ago Dan Tenenbaum ★ 8.2k

0

Entering edit mode

That worked! Thank you so much Dan.

ADD REPLY • link 9.7 years ago melanie.shook • 0

Login before adding your answer.