Entering edit mode
Anthony Bosco
▴
20
@anthony-bosco-998
Last seen 10.6 years ago
Hi,
I have just tried the PLIER algorithm and the M vs A
plots look wierd (see attachment).
R commands
data<-ReadAffy()
eset<-justPlier(data)
m<-eset@exprs[,2]-eset@exprs[,1]
a<-(eset@exprs[,2]+eset@exprs[,1])/2
plot(a,m)
regards
Anthony