Question

similar limma's contrast.fit function for lme (mixed effect model) object

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shirley zhang ★ 1.0k

@shirley-zhang-2038

Last seen 10.2 years ago

Dear Bioconductor, In limma package, contrasts.fit() function is very useful. I am wondering whether there is a similar function for lme object. Thanks, Shirley

limma limma • 1.1k views

ADD COMMENT • link updated 8.7 years ago by Gregory Warnes ▴ 50 • written 17.4 years ago by shirley zhang ★ 1.0k

score 1 · Answer 1 · 2016-03-11

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Gregory Warnes ▴ 50

@gregory-warnes-2155

Last seen 8.4 years ago

United States

The gmodels package has a fit.contrast() function that works with lme objects. See the ?gmodels::fit.contrast man page (http://www.inside-r.org/packages/cran/gmodels/docs/fit.contrast)

ADD COMMENT • link 8.7 years ago Gregory Warnes ▴ 50