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lily ▴ 20
@lily-11438
Last seen 3.5 years ago
India

Hi

I have got the result like this

> count.DEnumber(res1,p.cut=c(0.001,0.005),q.cut=c(0.01,0.05))

$pval.table

        data1 data2 data3 data4 data5 data6 Fisher maxP

p=0.001       12       4      698      180     1118       3    785   74

p=0.005       70      16     1430      572     1863      33   1587  226

 

$FDR.table

         data1 data2 data3 data4  data5  data6 Fisher maxP

FDR=0.01        0       0      505        1     1170       0    643    3

FDR=0.05        0       0     1836      129     2515       0   2144   16

I got the gene count no . Now i want to visualize the genes according to their p value and FDR values. 

how will i save the result including the genes with their cut off in tab format ?

MetaDE • 1.2k views
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