Regarding the metagene package (http://www.bioconductor.org/packages/release/bioc/html/metagene.html).

Can I move the legend of the final plot to a different position?

At the moment I am using the plot command like this:

mg$plot(title = "test metagene plot")

The legend then appears on the right of the plot, which is problematic. Can I move the legend somewhere else (f.e. top or bottom)?

Hello Anton,

The simplest way to tweak the visual representation of the metagene plot is to extract the plot with the <font face="monospace">get_plot</font> function and use standard ggplot2 functions:

mg$plot(title = "test metagene plot")
p <- mg$get_plot()
p  + ggplot2::theme(legend.position="bottom")

Cheers!

Charles.