Rgin build error
1
0
Entering edit mode
@e6d99402
Last seen 2.8 years ago
United Kingdom
  • R: 4.1.2
  • OS: ArchLinux
  • gcc: 11.2.0

I have installed the r-rcpp, but it still told me that Rcpp.h: No such file or directory

Code should be placed in three backticks as shown below


* installing *source* package ‘Rgin’ ...
** using staged installation
** libs
gcc -I"/usr/include/R/" -DNDEBUG  -I'/usr/lib/R/library/RcppEigen/include' -I/usr/local/include   -fpic  -march=x86-64 -mtune=generic -O2 -pipe -fno-plt -fexceptions         -Wp,-D_FORTIFY_SOURCE=2 -Wformat -Werror=format-security         -fstack-clash-protection -fcf-protection -flto  -c Rgin-init.c -o Rgin-init.o
g++ -std=gnu++14 -I"/usr/include/R/" -DNDEBUG  -I'/usr/lib/R/library/RcppEigen/include' -I/usr/local/include  -std=c++11 -fopenmp -D_USE_KNETFILE -D_FILE_OFFSET_BITS=64 -U_FORTIFY_SOURCE -DBGZF_CACHE -DAS_GINLIB -DAS_RGINLIB -I./include -I./lib `/usr/lib64/R/bin/Rscript -e "Rcpp:::CxxFlags()"` -lz -fpic  -march=x86-64 -mtune=generic -O2 -pipe -fno-plt -fexceptions         -Wp,-D_FORTIFY_SOURCE=2 -Wformat -Werror=format-security         -fstack-clash-protection -fcf-protection -Wp,-D_GLIBCXX_ASSERTIONS -flto  -c src/feature_selection/feature_selector.cc -o src/feature_selection/feature_selector.o
g++ -std=gnu++14 -I"/usr/include/R/" -DNDEBUG  -I'/usr/lib/R/library/RcppEigen/include' -I/usr/local/include  -std=c++11 -fopenmp -D_USE_KNETFILE -D_FILE_OFFSET_BITS=64 -U_FORTIFY_SOURCE -DBGZF_CACHE -DAS_GINLIB -DAS_RGINLIB -I./include -I./lib `/usr/lib64/R/bin/Rscript -e "Rcpp:::CxxFlags()"` -lz -fpic  -march=x86-64 -mtune=generic -O2 -pipe -fno-plt -fexceptions         -Wp,-D_FORTIFY_SOURCE=2 -Wformat -Werror=format-security         -fstack-clash-protection -fcf-protection -Wp,-D_GLIBCXX_ASSERTIONS -flto  -c src/feature_selection/scones.cc -o src/feature_selection/scones.o
In file included from ./include/gin/feature_selection/scones.h:8,
                 from src/feature_selection/scones.cc:5:
./include/gin/globals.h:60:10: fatal error: Rcpp.h: No such file or directory
   60 | #include "Rcpp.h"
      |          ^~~~~~~~
compilation terminated.
make: *** [/usr/lib64/R/etc/Makeconf:175: src/feature_selection/scones.o] Error 1
make: *** Waiting for unfinished jobs....
In file included from ./include/gin/feature_selection/scones.h:8,
                 from src/feature_selection/feature_selector.cc:9:
./include/gin/globals.h:60:10: fatal error: Rcpp.h: No such file or directory
   60 | #include "Rcpp.h"
      |          ^~~~~~~~
compilation terminated.
make: *** [/usr/lib64/R/etc/Makeconf:175: src/feature_selection/feature_selector.o] Error 1
ERROR: compilation failed for package ‘Rgin’
* removing ‘/build/r-rgin/src/Rgin’
* restoring previous ‘/build/r-rgin/src/Rgin’
Rgin • 775 views
ADD COMMENT
0
Entering edit mode
@james-w-macdonald-5106
Last seen 1 day ago
United States

Still not you.

ADD COMMENT

Login before adding your answer.

Traffic: 876 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6