Deleted:Help with geom_dotplot() script
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marinaw ▴ 20
@9c8b15cf
Last seen 23 months ago
Canada

I'm rather new to R so any help would be much appreciated. Does someone know how to adjust the following script so that I can present a dot plot with these sort of deconvolution proportions? I can't seem to make it work.

enter image description here

# read in the Subject*Counts (raw counts) matrix
deconv <- read.csv("dtangle_VL_dataset.csv",
                          sep= ",",
                          header = TRUE,
                          row.names=1,
                          stringsAsFactors = F)

geom_dotplot(data = deconv,
  position = "identity",
  binwidth = NULL,
  binaxis = "x",
  method = "dotdensity",
  binpositions = "bygroup",
  stackdir = "up",
  stackratio = 1,
  dotsize = 1,
  stackgroups = FALSE,
  origin = NULL,
  right = TRUE,
  width = 0.9,
  drop = FALSE,
  na.rm = FALSE,
  show.legend = NA,
  inherit.aes = TRUE
)
ggplot DeconRNASeq • 587 views
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