Hi everyone!

I have generated a shotgun metagenomics data. I have run RGI of the assembled reads using CARD as the database. Now I want to calculate the abundance of the antibiotic resistant genes (ARGs) in the resulting .tsv files. Could you kindly share the method used to calculate the relative abundance of ARGs like a pipeline or something OR any video links that might be of help.

Hoping to hear from you all.

Thanks and regards

Yasir