Hi all,

In using DiffBind I wanted to basically get a set on shared/diff peaks and wondering how to parse shared as being within a certain fold change window/FDR and diff peaks being on the +/- of this window also with an FDR cutoff? Thanks.

Rob

Hi,

If you set the FDR threshold to 1.0, then you'll get a table with all results.  After that you can filter any way you like, via normal R methods.

 - Gord