Dear all,

I am trying to use ImpulseDE2 to analyze my time-source RNA-seq data. It confused me that how I should filter the low expression genes in this pipline. Should I follow the DESeq2 standard, or is there any better method to realize it?

Thank you!

I think ImpulseDE2 is no longer part of Bioconductor (the package landing page doesn't exist). Maybe try here:

https://github.com/YosefLab/ImpulseDE2/issues