Hello, 

I received an error message while running FunciSNP tutorial.

> glioma <- getFSNPs(snp.regions.file=glioma.snp, bio.features.loc = glioma.bio,bio.features.TSS=FALSE);
Error in getFSNPs(snp.regions.file = glioma.snp, bio.features.loc = glioma.bio,  :
  unused argument (bio.features.TSS = FALSE)

> glioma <- getFSNPs(snp.regions.file=glioma.snp, bio.features.loc = glioma.bio,bio.features.TSS=TRUE);
Error in getFSNPs(snp.regions.file = glioma.snp, bio.features.loc = glioma.bio,  :
  unused argument (bio.features.TSS = TRUE)    
 

I do not know how to solve this error message because I was just following the tutorial/Rcode line by line to understand the package functions.

Would you please advise?

Thank you.

Anita 

R version 3.3.1 (2016-06-21)
Platform: x86_64-apple-darwin13.4.0 (64-bit)
Running under: OS X 10.12 (Sierra)

locale:
[1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8

attached base packages:
 [1] grid      stats4    parallel  stats     graphics  grDevices utils     datasets  methods   base     

other attached packages:
 [1] FunciSNP_1.16.0                         FunciSNP.data_1.10.0                    d3heatmap_0.6.1.1                      
 [4] ComplexHeatmap_1.12.0                   Heatplus_2.20.0                         heatmap.plus_1.3                       
 [7] Homo.sapiens_1.3.1                      GO.db_3.4.0                             OrganismDbi_1.16.0                     
[10] BiocInstaller_1.24.0                    SNPlocs.Hsapiens.dbSNP142.GRCh37_0.99.5 ggbio_1.22.3                           
[13] ggplot2_2.2.1                           BSgenome.Hsapiens.UCSC.hg19_1.4.0       BSgenome_1.42.0                        
[16] rtracklayer_1.34.1                      org.Hs.eg.db_3.4.0                      TxDb.Hsapiens.UCSC.hg19.knownGene_3.2.2
[19] GenomicFeatures_1.26.2                  AnnotationDbi_1.36.2                    AnnotationHub_2.6.4                    
[22] VariantAnnotation_1.20.2                Rsamtools_1.26.1                        Biostrings_2.42.1                      
[25] XVector_0.14.0                          SummarizedExperiment_1.4.0              Biobase_2.34.0                         
[28] GenomicRanges_1.26.2                    GenomeInfoDb_1.10.2                     IRanges_2.8.1                          
[31] S4Vectors_0.12.1                        BiocGenerics_0.20.0                     edgeR_3.16.5                           
[34] limma_3.30.9                           

loaded via a namespace (and not attached):
  [1] colorspace_1.3-2              seqinr_3.3-3                  rjson_0.2.15                  class_7.3-14                  modeltools_0.2-21            
  [6] rsconnect_0.7                 mclust_5.2.2                  biovizBase_1.22.0             circlize_0.3.9                htmlTable_1.9                
 [11] futile.logger_1.4.3           GlobalOptions_0.0.10          base64enc_0.1-3               dichromat_2.0-0               ChIPpeakAnno_3.8.9           
 [16] flexmix_2.3-13                interactiveDisplayBase_1.12.0 mvtnorm_1.0-5                 snpStats_1.24.0               splines_3.3.1                
 [21] robustbase_0.92-7             knitr_1.15.1                  ade4_1.7-5                    Formula_1.2-1                 annotate_1.52.1              
 [26] kernlab_0.9-25                cluster_2.0.5                 png_0.1-7                     graph_1.52.0                  shiny_1.0.0                  
 [31] httr_1.2.1                    backports_1.0.5               assertthat_0.1                Matrix_1.2-8                  lazyeval_0.2.0               
 [36] acepack_1.4.1                 htmltools_0.3.5               tools_3.3.1                   gtable_0.2.0                  reshape2_1.4.2               
 [41] Rcpp_0.12.9                   trimcluster_0.1-2             multtest_2.30.0               fpc_2.1-10                    stringr_1.1.0                
 [46] mime_0.5                      ensembldb_1.6.2               XML_3.98-1.5                  dendextend_1.4.0              idr_1.2                      
 [51] DEoptimR_1.0-8                zlibbioc_1.20.0               MASS_7.3-45                   scales_0.4.1                  RBGL_1.50.0                  
 [56] lambda.r_1.1.9                RColorBrewer_1.1-2            yaml_2.1.14                   curl_2.3                      memoise_1.0.0                
 [61] gridExtra_2.2.1               biomaRt_2.30.0                rpart_4.1-10                  reshape_0.8.6                 latticeExtra_0.6-28          
 [66] stringi_1.1.2                 RSQLite_1.1-2                 genefilter_1.56.0             checkmate_1.8.2               BiocParallel_1.8.1           
 [71] shape_1.4.2                   matrixStats_0.51.0            prabclus_2.2-6                bitops_1.0-6                  lattice_0.20-34              
 [76] GenomicAlignments_1.10.0      htmlwidgets_0.8               labeling_0.3                  GGally_1.3.0                  plyr_1.8.4                   
 [81] magrittr_1.5                  R6_2.2.0                      Hmisc_4.0-2                   DBI_0.5-1                     whisker_0.3-2                
 [86] foreign_0.8-67                survival_2.40-1               RCurl_1.95-4.8                nnet_7.3-12                   tibble_1.2                   
 [91] futile.options_1.0.0          viridis_0.3.4                 GetoptLong_0.1.5              locfit_1.5-9.1                data.table_1.10.0            
 [96] digest_0.6.12                 diptest_0.75-7                VennDiagram_1.6.17            xtable_1.8-2                  regioneR_1.6.2               
[101] httpuv_1.3.3