User: dwzhang.wisc

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dwzhang.wisc20
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Posts by dwzhang.wisc

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Comment: C: Interaction terms in DESeq2 contrasts
... I see, thanks for the clarification Michael. I will rethink how I design this specific model. I appreciate the help.     ...
written 3.3 years ago by dwzhang.wisc20
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Answer: A: Interaction terms in DESeq2 contrasts
... Thanks for the response Michael. Let me clarify: I have 7 patients who are healthy controls (HC) and 7 patients with rheumatoid arthritis (RA). For each patient, we isolated three different cell populations, labelled Na, CM, and EM. I want to compare whether the Na samples from RA patients are diffe ...
written 3.3 years ago by dwzhang.wisc20
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Interaction terms in DESeq2 contrasts
... Hello, I have a question about setting up interaction terms in DESeq2 following the recent update. My experiment consists of 42 total samples, from 14 donors, across three different cell populations, and two different disease states (healthy control vs RA). My sample block is as follows: patient ...

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Popular Question 3.2 years ago, created a question with more than 1,000 views. For Interaction terms in DESeq2 contrasts

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