Admin: shepherl

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shepherl ♦♦ 530
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Posts by shepherl

<prev • 103 results • page 1 of 11 • next >
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Answer: A: How can I remove the ellipsis and get the complete sequence and results?
... Using as.character() on your DNAStringSet might be the desired output. You can also get more information on using and working with DNAStringSets by looking at the help page ?DNAStringSet ...
written 4 weeks ago by shepherl ♦♦ 530
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News: List of Deprecated Packages for Bioc3.7
... The Bioconductor Team is continuing to identify packages that will be deprecated in the next release to allow for the Bioconductor community to respond accordingly. The list will be updated monthly. The current list of deprecated packages is as follows: Maintainer requested deprecation: Software ...
news package updates deprecate written 4 weeks ago by shepherl ♦♦ 530
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News: ensembl 91 gtfs and fasta twobits have been added to AnnotationHub
... Hello all, The ensembl 91 gtf (converted to GRanges on the fly) and fasta (twobit files) been added to AnnotationHub and are currently available in Bioc 3.6 (release) and Bioc3.7 (development) Bioconductor version 3.6 (BiocInstaller 1.28.0), ?biocLite for help > library(AnnotationHub) > hub ...
annotationhub news ensembl gtf 2bit written 9 weeks ago by shepherl ♦♦ 530
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News: List of Deprecated Packages for Bioc 3.7
... The Bioconductor Team is continuing to identify packages that will be deprecated in the next release to allow for the Bioconductor community to respond accordingly. The list will be updated monthly. The current list of deprecated packages is as follows: Maintainer requested deprecation: Software Pac ...
news package updates deprecate written 9 weeks ago by shepherl ♦♦ 530
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Answer: A: Single Package Builder Updates and Testing
... Testing is complete. The single package builder should be functioning normally. Thank you for your patience.  ...
written 10 weeks ago by shepherl ♦♦ 530
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News: Single Package Builder Updates and Testing
... The Single Package Builder will be undergoing some updating and testing over the next few days.  While it will still be active and generating reports, there may be intermittent periods of inactivity.  We hope this will be to a minimum and will notify when testing is complete.   ...
news packages review spb written 10 weeks ago by shepherl ♦♦ 530
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Comment: C: Biocgenerics updating problem on ubuntu 17.10
... Based on this message ``` installation path not writeable, unable to update packages: Rcpp, BiocGenerics ``` I would guess that there might be some permissions issues on the directories you are trying to write.  Please check the results of  `.libPaths()`  and check where `BiocGenerics` is instal ...
written 12 weeks ago by shepherl ♦♦ 530
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Answer: A: Question: Problem fetching resources from AnnotationHub, AH58059,error 403
... Sorry for the inconvenience. The Annotation files and database has been updated and accurate with snapshotData(): 2017-11-24. > library(AnnotationHub) > hub = AnnotationHub() updating metadata: retrieving 1 resource |======================================================================| 10 ...
written 3 months ago by shepherl ♦♦ 530
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Comment: C: Biocgenerics updating problem on ubuntu 17.10
... Could you please provide more information?  Include the commands you tried to use to update BiocGenerics with the output they produce as well as the results of sessionInfo() ...
written 3 months ago by shepherl ♦♦ 530
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Comment: C: Question: Problem fetching resources from AnnotationHub, AH58059,error 403
... The files are being regenerated. They should be fixed by Friday. Sorry for the inconvenience. I will post again when they are updated.  ...
written 3 months ago by shepherl ♦♦ 530

Latest awards to shepherl

Scholar 22 months ago, created an answer that has been accepted. For A: survcomp package - censor missing
Teacher 22 months ago, created an answer with at least 3 up-votes. For A: survcomp package - censor missing

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