Admin: shepherl

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shepherl ♦♦ 510
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Posts by shepherl

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Comment: C: Question: Problem fetching resources from AnnotationHub, AH58059,error 403
... The files are being regenerated. They should be fixed by Friday. Sorry for the inconvenience. I will post again when they are updated.  ...
written 6 hours ago by shepherl ♦♦ 510
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News: List of Deprecated Packages for Bioc3.7
... The Bioconductor Team is continuing to identify packages that will be deprecated in the next release to allow for the Bioconductor community to respond accordingly. The list will be updated monthly. The current list of deprecated packages is as follows: Maintainer requested deprecation: Software ...
news deprecate written 14 hours ago by shepherl ♦♦ 510
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Comment: C: cran check shows that genefilter is not available
... And you have installed those packages:  source("https://bioconductor.org/biocLite.R") biocLite(c("genefilter","edgeR","DESeq","aroma.light")) Are there any other ERRORs produced when trying to run the above code?    ...
written 2 days ago by shepherl ♦♦ 510
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Answer: A: OrgDbs in AnnotationHub
... The OrgDb Annotations in AnnotationHub have been updated and are available again.  Thank you for your patience.  ...
written 5 days ago by shepherl ♦♦ 510
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Comment: C: cran check shows that genefilter is not available
... could you please provide your sessionInfo() ; what os are you using? ...
written 5 days ago by shepherl ♦♦ 510
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News: OrgDbs in AnnotationHub
... The OrgDb's that we normally offer in AnnotationHub that are not offered as our Standard OrgDb packages are currently unavilable in Bioc 3.6. We are updating the files and will notify when they are back online. Thank you for your understanding. Lori ...
orgdb annotationhub news written 6 days ago by shepherl ♦♦ 510
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Answer: A: Error installing flowDensity on latest docker container
... Try apt-get install dh-autoreconf this should install the correct versions of automake that is needed. Once this was run I was able to biocLite("RProtoBufLib") ...
written 7 days ago by shepherl ♦♦ 510
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Answer: A: Single Package Builder / New Package Submission
... Until the CRAN binaries are available for windows we will temporarily not be building on windows    See reference from mailing list:  https://stat.ethz.ch/pipermail/bioc-devel/2017-November/012265.html ...
written 8 days ago by shepherl ♦♦ 510
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Answer: A: Single Package Builder / New Package Submission
... Thank you! Our transition is complete. New submissions should now be building on R 3.5 and Bioc 3.7.   ...
written 8 days ago by shepherl ♦♦ 510
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News: Single Package Builder / New Package Submission
... We will begin to update the single package builders used to build and check new package submission to R 3.5 Bioc 3.7 today.  While this is occurring the single package builder will be off line and there will be no builds for newly submitted packages.   Thank you for your patience and understanding. ...
news packages build report new submission written 8 days ago by shepherl ♦♦ 510

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Scholar 19 months ago, created an answer that has been accepted. For A: survcomp package - censor missing
Teacher 19 months ago, created an answer with at least 3 up-votes. For A: survcomp package - censor missing

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