User: thackl
thackl • 0
- Reputation:
- 0
- Status:
- New User
- Last seen:
- 2 years, 8 months ago
- Joined:
- 3 years, 1 month ago
- Email:
- t*****@lim4.de
Profile information, website and location are not shown for new users.
This helps us discourage the inappropriate use of our site.
Posts by thackl
<prev
• 3 results •
page 1 of 1 •
next >
0
votes
2
answers
704
views
2
answers
... Yes, that's what I was afraid of. But rather than including the entire stretch of unmapped bases (as IGV does and which needs to be accounted for in stacking etc), would it be possible to just color or mark the start/end of a read if the cigar starts/ends with an S/H?
...
written 3.1 years ago by
thackl • 0
0
votes
2
answers
704
views
2
answers
... I like the idea of splitting into clipped/non-clipped reads. But as you said, it is a practical, but not really satisfying solution :)
...
written 3.1 years ago by
thackl • 0
2
votes
2
answers
704
views
2
answers
... I am using Gviz to visualize mappings of PacBio data (bam files) onto contigs. I was wondering if there is any way to display soft-clipped bases at read ends, or at least indicate reads with soft-/hard-clipped ends. That would help a lot in spotting structural variations and potential misassemblies. ...
written 3.1 years ago by
thackl • 0
• updated
3.1 years ago by
florian.hahne@novartis.com • 1.6k
Latest awards to thackl
No awards yet. Soon to come :-)
Use of this site constitutes acceptance of our User
Agreement
and Privacy
Policy.
Powered by Biostar
version 16.09
Traffic: 135 users visited in the last hour