User: chaoqiang.lai

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Posts by chaoqiang.lai

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Answer: A: Error with IlluminaHumanMethylation450Kmanifest when trying to run ChAMP
... There is one possibility that gives such an error - please check your sample_sheet.csv file, and make sure the values of "Sentrix_ID" column matching the first number of the idat file name in the folder. Because the digits (barcode number) of the "Sentrix_ID"  are so long,  they could be in a "scien ...
written 3.3 years ago by chaoqiang.lai0
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"error: C stack usage 265532545 is too close to the limit" with running ChAMP
... I was running a set of command lines of ChAMP (see below) to normalize methylation beta values from Illumina 450K methylation arrays  for 93 individuals. After running for about 3 days, the run stopped with this error message: "Error: C stack usage 265532545 is too close to the limit" Anyone knows ...
champ written 3.4 years ago by chaoqiang.lai0

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