User: c.kohler

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c.kohler0
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Posts by c.kohler

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design matrix and contrast for paired experiment using NanoStringDiff for nCounter data
... Dear Bioconductors, I have a NanoString nCounter dataset consisting of paired data (conditions A and B) with some additional measurements for samples in condition B. My current setting consists of 5 patients and 2 conditions: df<-data.frame(pair=c("p1","p1","p2","p2","p2","p3","p3","p4","p4" ...
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Answer: A: broken link to www.godatabase.org in results generated by htmlReport() from GOst
... Dear James, thanks for your quick reply :-)   Regards Christian ...
written 3.3 years ago by c.kohler0
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broken link to www.godatabase.org in results generated by htmlReport() from GOstats package ?
... Dear Bioconductors, I'm using GOstats for computing over-representation of GO terms based on a list of entrezIDs. As final step, I'm generating an html report using htmlReport() on the resulting "GOHyperGResult" object. params <- new("GOHyperGParams",               geneIds=as.character(selected ...
gostats www.godatabase.org htmlreport written 3.3 years ago by c.kohler0

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