User: georges.bedran
georges.bedran • 0
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Posts by georges.bedran
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... Hello,
since the last few bioconductor updates the keepSeqlevels functions had the default pruning.mode option changed to raise an erorr in case arg1 and arg2 contain different levels (chromosomes).
You only have to add the argument pruning.mode="coarse" to replicate the old behaviour.
You just h ...
written 18 months ago by
georges.bedran • 0
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... Hello,
I'm currently working on a proteogenomics project, and using customProDB to generate a custom protein database, it's a great R package and i find it really helpful.
However, I recently discovered a bug with the aaVariation function were Leucine is predicted as Methionine.
# R example :
&g ...
written 18 months ago by
georges.bedran • 0
• updated
14 months ago by
xiaojing.wang • 50
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... hello,
I'm currently working on a proteogenomics project, and using customProDB to generate a custom protein database, it's a great R package and i find it really helpful.
Since the last package update i noticed that the function OutputVarproseq has started generating the following error :
Erro ...
written 2.9 years ago by
georges.bedran • 0
• updated
2.8 years ago by
xiaojing.wang • 50
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... hello,
i'm currently working on a proteogenomics project, and i am using customProDB to generate a custom DB, it's a great R package and i find it really helpful.
During the process and while trying to generate my novel junctions peptides fasta, I believe that I ran into a little bug.
at line 131 ...
written 3.3 years ago by
georges.bedran • 0
• updated
3.3 years ago by
xiaojing.wang • 50
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