User: calen.p.ryan

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Posts by calen.p.ryan

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Comment: C: Error from eBayes in limma package
... Thanks James, you just pointed out an obvious error in my code I was totally staring at yet still missing - now I feel silly! ...
written 3 months ago by calen.p.ryan0
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Error from eBayes in limma package
... Hi experts, I am trying to compare methylation for people with four combinations of childhood/adulthood socioeconomic status: 160 = LOW/LOW, 90 = LOW/HIGH, 90 = HIGH/LOW, 160 = HIGH/LOW. I want to look for differences in DNAm between these groups. My design matrix appears as follows: (Int ...
limma error ebayes written 3 months ago by calen.p.ryan0 • updated 3 months ago by James W. MacDonald45k
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Answer: A: Error trying to run "seqlm" example
... Problem has been solved by the package maintainer and is now working. ...
written 16 months ago by calen.p.ryan0
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Comment: C: Error trying to run "seqlm" example
... Ok thanks @Martin Morgan . I thought this might be bioconductor solvable but I'll contact the maintainer. If there's a workaround should I post it here for others, or restrict to bioconductor packages? Thanks again. ...
written 16 months ago by calen.p.ryan0
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Error trying to run "seqlm" example
... I'm trying to get the seqlm package running for a DMR analysis I'd like to conduct, first by simply running the example provided with the package, but am already getting an error I have no idea how to deal with. After installing the required packages (and all dependencies), followed by update.packa ...
iranges R dmr analysis namespace seqlm written 16 months ago by calen.p.ryan0

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