User: Martin Pirkl

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Posts by Martin Pirkl

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Comment: C: possible bug in parseKGML?
... Dear David, Thank you for the fast reply. Do I understand correctly, that you assume a direction for the "binding/association" for nodes 47 and 53, even though the diagram does not show a direction? In the diagram there is an undirected edge from LAT to  PLC-gamma1, which activates CAN and in turn ...
written 2.2 years ago by Martin Pirkl0
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possible bug in parseKGML?
... Hi, how is the "binding/association" tag handled, when a xml is parsed to a graph object in R? E.g. for the entry <relation entry1="47" entry2="53" type="PPrel"> <subtype name="binding/association" value="---"/> </relation> I get an arrow from 47 to 53. However, shoul ...
kegggraph written 2.3 years ago by Martin Pirkl0

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