User: Sophie Marion de Proce

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New User
Location:
University of Edinburgh
Last seen:
4 months, 2 weeks ago
Joined:
10 months, 3 weeks ago
Email:
s*********@gmail.com

Posts by Sophie Marion de Proce

<prev • 6 results • page 1 of 1 • next >
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Filtering absent transcripts from Gene ST array
... Dear all, I've been going round in circles with a microarray analysis, as this is the first time I analyse microarray data! I had initially used oligo for my analysis, and managed to get results of differential expression both at the transcript level and at the probeset level. The reason why I th ...
microarray oligo gene st pacalls written 5 months ago by Sophie Marion de Proce0 • updated 5 months ago by James W. MacDonald44k
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Comment: C: Cannot install xps package, Mac OS 10.11, R 3.3
... Dear Christian, Thank you very much for your help, disabling the System Integrity Protection by running csrutil disable in the terminal in the Recovery mode did work, I've finally had success installing xps! > library(xps) Welcome to xps version 1.34.0 an R wrapper for XPS - eXpression Pro ...
written 10 months ago by Sophie Marion de Proce0
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Comment: C: Cannot install xps package, Mac OS 10.11, R 3.3
... Dear Christian, Thank you for your reply. Unfortunately, replacing the DYLD_LIBRARY_PATH line in the .bashrc file by  the DYLD_FALLBACKLIBRARY_PATH didn't work either. Best wishes, Sophie. ...
written 10 months ago by Sophie Marion de Proce0
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Comment: C: Cannot install xps package, Mac OS 10.11, R 3.3
... Could it possibly be because of this (https://cran.r-project.org/doc/manuals/r-patched/R-admin.html)? Although setting this variable doesn't work either. "as from 10.11 (‘El Capitan’) the default behaviour had been changed for security reasons to discard these environment variables when invoking a ...
written 10 months ago by Sophie Marion de Proce0
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Comment: C: Cannot install xps package, Mac OS 10.11, R 3.3
... Dear Christian, Thank you for your  answer. I have started it all again to make sure I didn't miss anything from you reply and README file, and I still encounter the same issue. Here are details of what I have done. I've installed gfortran. I've installed ROOT from source using root_v5.34.36.sour ...
written 10 months ago by Sophie Marion de Proce0
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Cannot install xps package, Mac OS 10.11, R 3.3
... Dear all, I've been trying to install the Bioconductor eps package for several days and cannot get it to work. I would be very grateful for any help. After reading many forum posts and trying several methods, I've installed root version 5.34.36 using the dmg (root_v5.34.36.macosx64-10.11-clang70.d ...
xps installation written 10 months ago by Sophie Marion de Proce0 • updated 10 months ago by cstrato3.8k

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