User: Ting

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Ting0
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Posts by Ting

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Comment: C: DESeq2 time-series data of multiple treatments with common time 0
... Hi Michael, As I checked the comparisons of the analysis, it showed: > resultsNames(cdsFull) "Intercept" "times03" "times06" "times12" "times03.treatmentstreatment2" "times06.treatments treatment2" "times12.treatments treatment2" "times01.treatmentsYeast" "times03.treatments tr ...
written 2.3 years ago by Ting0
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Comment: C: DESeq2 time-series data of multiple treatments with common time 0
... Hi Michael, With your solution, it works well now! Thank you so much for the prompt reply.   ...
written 2.3 years ago by Ting0
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DESeq2 time-series data of multiple treatments with common time 0
... Hi all, I'd like to use DESeq2 for treatment-specific differences over time. Here is my colData with a common time 0 for Mock, treatment1 and treatment 2: > as.data.frame(colData(cds))                   times    treatments Control_a            00        Mock Control_b            00        Mock ...
deseq2 multiple time points multiple treatments written 2.3 years ago by Ting0 • updated 2.3 years ago by Michael Love24k

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Popular Question 2.3 years ago, created a question with more than 1,000 views. For DESeq2 time-series data of multiple treatments with common time 0

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