User: jordansquair

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Posts by jordansquair

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Answer: A: xps package - import.expr.scheme help
... Hi Christian, Thanks for you help with this. I've re-located the directories and still seem to be getting the same error message. I've set verbose=TRUE and run in xterm. Here is the output: diffexpr/Preprocess-DiffExpr-xps.R Loading required package: methods Error: cannot open file "iostream"  /va ...
written 9 months ago by jordansquair0
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Answer: A: xps package - import.expr.scheme help
... Hi Christian, Thanks for the quick reply. I have pulled the necessary files from Affymetrix and followed your example,  `scheme.rgu34a.na31 <- import.expr.scheme("rgu34a",filedir=file.path(scmdir, "na31"),                                          schemefile = file.path(libdir,"RG_U34A.cdf"),   ...
written 9 months ago by jordansquair0
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xps package - import.expr.scheme help
... Hello, I am trying to process some expression data using the xps package and having some trouble importing the root schemes for the probes. Here is the code:  `library(xps) ## define paths scmdir <- paste(path.package("xps"), "/schemes", sep = "") libdir <- "mypath//libraryfiles" anndir < ...
affy xps R root written 9 months ago by jordansquair0 • updated 9 months ago by cstrato3.8k

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