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Posts by Tony
Comment: C: edgeR ANOVA-like analysis
... Thanks a lot for your reply Aaron. I'm not sure if I completely understood why the grand means would cancel out. So if I have 10 groups, testing contrast of any one group against the 9 others should then be equivalent to testing each of the 10 groups against the grand means, correct? ...
... I would like to use edgeR to perform an ANOVA for difference between multiple groups, but am wondering what the best way is to do this. I have an RNA-seq experiment with multiple groups that I modeled without an intercept term (because there is no control group). I find the ANOVA-like test described ...
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