User: arronar

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arronar0
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Posts by arronar

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Two questions about pathifier package
... Hello out there. I'm currently trying to use pathifier package against a microarray dataset. That specific dataset looks like : Genes Cell-line-A Cell-line-A-Treated Cell-line-B Cell-line-B-Treated Cell-line-C Cell-line-C-Treated Gene1 exprs.val exprs.val ...
microarray pathways statistics written 11 months ago by arronar0
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Trying to annotate microarray data and some probe set presents mismatch
... Hello. I'm trying three days now to figure out how to fix this issue with an automatic way but so far couldn't fix it. Here is the story. I'm trying to analyse a dataset that has been produced on Affymetrix GeneChip Human Genome U133 Plus 2.0 . After applying RMA algorithm , I used the following ...
annotation affymetrix microarrays written 12 months ago by arronar0 • updated 12 months ago by James W. MacDonald48k
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mulcom Error in input files
... Hello. I just installed the mulcom package to run the mulcom test on my microarray dataset (they are in a data frame). For the first comparison I select only the Control and the Treatment1 CtvT1 = Data[,1:23] groups = as.vector(c(rep("0",10), rep("1",13))) mulcomScores = mulScores(CtvT1, group ...

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