User: andres.firrincieli

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Posts by andres.firrincieli

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Comment: C: how to filter genes in significant module?
... Hi Modarzi, You could run a Gene Enrichment Analysis on modules without filtering, and then focus on the hub of the module i.e., the genes with the highest [intramodular connectivity][1]. The hub could includes genes that are known to be involved in that specific pathway. [1]: https://www.rdocum ...
written 5 weeks ago by andres.firrincieli10
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cluserRepro for IGP calculation - long running time
... Dear All, I am using the clusterRepro function to calculate the In-Group Proportion (IGP) of a network of 13000 genes. I have launched the analysis 9 days ago and it is still ongoing. I am aware that clusterRepro can take days, even weeks, for the IGP calculation so my question is: how long would i ...
clusterrepro written 2.4 years ago by andres.firrincieli10

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