User: reuscher.stefan

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Posts by reuscher.stefan

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Comment: C: What is the best way to subset a DNAStringSet by a GRange ?
... A hierarchical, one-dimensional subscript. That's exactly what I need to know to. I will figure it out from here. Thanks for your great advice. ...
written 7 months ago by reuscher.stefan0
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Comment: C: What is the best way to subset a DNAStringSet by a GRange ?
... Thanks Michael, that is exactly what is was looking for and could not find on any of the help files, (or I overlooked it). Since this syntax is not obvious to me, do you mind explaining what is going on here. Suppose I want to isolate one subsequence from a DNAStringSet, I can put in a GRanges, but ...
written 7 months ago by reuscher.stefan0
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What is the best way to subset a DNAStringSet by a GRange ?
... Hi All, I recently had some task which I thought should be easy to accomplish. I wanted to subset a DNAStringSet (a whole genome) using the information in a GRanges object (output of tileGenome()). I searched quite a bit in the help and here but could not find a "bioconductor" way of doing it and e ...
biostrings granges bioconductor written 7 months ago by reuscher.stefan0 • updated 7 months ago by Michael Lawrence9.8k

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