User: stats134711

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Posts by stats134711

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Where to find open access microbiome data for case-control comparative study?
... I would like to do a comparative study of some methods that require human microbiome data from two groups, preferably healthy controls and diseased cases. Does anyone know of available datasets that are already in OTU table format and are of reasonable size whether it is through R packages or other ...
microbiome data analysis data request written 2.4 years ago by stats1347110 • updated 2.4 years ago by Wolfgang Huber13k
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Comment: C: Downloading specific subset of SRA files
... Please Ignore...Is there a way to delete this question? ...
written 2.4 years ago by stats1347110
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Normalization/Transformation Before Microbiome Alpha Diversity Analysis
... In his post https://www.bioconductor.org/packages/release/bioc/vignettes/phyloseq/inst/doc/phyloseq-FAQ.html#should-i-normalize-my-data-before-alpha-diversity-analysis Paul McMurdie mentions that normalizing prior to alpha diversity analysis is highly not recommended. However, it seems to be in the ...

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