User: Sorani, Marco

gravatar for Sorani, Marco
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Last seen:
14 years, 4 months ago
Joined:
14 years, 6 months ago
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s******@pharmacy.ucsf.edu

Posts by Sorani, Marco

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lowess, quantreg, waveslim
... Has anyone used lowess, quantreg, waveslim (or other packages) to analyze CGH or DNA copy number data? A recent paper in the journal Bioinformatics mentions these packages but not how they were used. Thanks ****************** soranim at pharmacy.ucsf.edu Marco Sorani Program in Biological & ...
cgh written 14.3 years ago by Sorani, Marco30
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chromosome position --> gene
... Is there R code available that maps a chromosomal position (e.g., "chr2", "80,000,000") or range (e.g., "chr2", "80,000,000 - 90,000,000") to a gene? ****************** soranim at pharmacy.ucsf.edu Marco Sorani Program in Biological & Medical Informatics University of California, San Francisco ...
written 14.5 years ago by Sorani, Marco30 • updated 14.5 years ago by Sean Davis21k
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comparative genomics
... Can anyone suggest useful R resources (either full programs or pieces of code) to do comparative genomics such as genome visualization, alignments, ortholog detection, phylogeny construction, etc.? ****************** soranim at pharmacy.ucsf.edu Marco Sorani Program in Biological & Medical In ...
visualization written 14.5 years ago by Sorani, Marco30 • updated 14.5 years ago by Sean Davis21k

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