User: tjiagoM

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tjiagoM10
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Posts by tjiagoM

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Comment: C: What's the difference between p.adjust and qvalue?
... Ok, the package mentions that they are not creating adjusted pvalues. I will look with more attention, thanks. ...
written 5 months ago by tjiagoM10
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Comment: C: What's the difference between p.adjust and qvalue?
... Exactly, I saw that, but isn't that the same meaning as of an adjusted p-value? Because calculations of FDR are meant to change the pvalue, right? ...
written 5 months ago by tjiagoM10
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What's the difference between p.adjust and qvalue?
... In the result of an enrichGO() we have two columns, p.adjust and qvalue. I guess p.adjust is the pvalue modified after considering FDR, but then what actually is the qvalue?   ...
clusterprofiler written 5 months ago by tjiagoM10 • updated 5 months ago by Guido Hooiveld2.2k
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Answer: A: problem reinstalling Bioconductor package 'clusterProfiler' after updating R to
... I had a similar problem and a new session couldn't solve it.  So, just in case someone needs it, I solved the problem by defining the specific repository: biocLite("clusterProfiler", siteRepos = "https://bioconductor.org/packages/release/bioc/") ...
written 5 months ago by tjiagoM10

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