User: shadhiksk

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shadhiksk0
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Posts by shadhiksk

<prev • 9 results • page 1 of 1 • next >
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Problem while doing flowpeaks clustering
... Hello everyone, I was using flowPeaks in R for clustering. While doing so, I should get the 4 clusters which are to be vertically divided in the elliptical shape. But the clusters are dividing horizontally. Even I tried to change the arguments of the flowpeaks but it didn't make any change. I found ...
flowpeaks written 2.3 years ago by shadhiksk0
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Wait for user input with readline() while running a whole set of program
... Hello, I tried to run a set of functions which need to wait for the user's input but, It is executing taking the next command line as the input. can anyone tell me how can I use the code, so that the console waits for the user to input and assign a value? I used this command  : fun1 <- functio ...
scan readline written 2.3 years ago by shadhiksk0
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Problem in merging data frames
... Hello, I tried to merge the two data frames which are having the same column name and the values set to NA. It showed me an error  > total<-merge(l,h,by="a") Error: cannot allocate vector of size 3.8 Gb Can anyone suggest how to rectify and merge those two data frames!! ...
merge merge data frames written 2.3 years ago by shadhiksk0 • updated 2.3 years ago by Haiying.Kong110
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Answer: A: extracting cluster data after using flowpeaks
... Hello Sir Yongchao. I tried to relate the input data and peaks.cluster, but I'm unable to relate them. I didn't even found any documentation on R codes for flowPeaks other than the flowPeaks vignette for extracting the cluster data. Can u plz suggest some papers or the modules for the fore mentione ...
written 2.3 years ago by shadhiksk0
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Answer: A: Subsetting clusters in flowPeaks
... Hi Hefin, I am facing a problem of using flowpeaks for a flowframe to get the required clusters.  like here  fp2<-flowPeaks(barcode[,c(1,3)]) how can I replace barcode with a flowframe? can I know the format for R code? and fpc<-assign.flowPeaks(fp2,fp2$x)  what is fp2$x here mean? May I ...
written 2.3 years ago by shadhiksk0
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extracting cluster data after using flowpeaks
... I tried to identify the clusters in the flowdata using flowpeaks. Is that possible to extract the cluster data as a separate file individually for those many clusters formed? If anyone helps me in doing this it would be a great help for me. ...
flowpeaks written 2.3 years ago by shadhiksk0
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Answer: A: problem in installing flowclust
... > source("https://bioconductor.org/biocLite.R") Bioconductor version 3.5 (BiocInstaller 1.26.0), ?biocLite for help > biocLite("flowClust") BioC_mirror: https://bioconductor.org Using Bioconductor 3.5 (BiocInstaller 1.26.0), R 3.4.0 (2017-04-21). Installing package(s) ‘flowClust’ Package which ...
written 2.4 years ago by shadhiksk0
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can a function outliers be applied for a flowframe?
... is that possible if I use an outliers function for a flowframe I mean for an fcs file. I tried for removing the outliers in the flow cytometry data and I'm unable to do that. can u plz give me a solution for removing the outliers from the fcs files. ...
bioconductor flow cytometry rstudio written 2.4 years ago by shadhiksk0 • updated 2.4 years ago by SamGG190
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problem in installing flowclust
... I'm facing problem in installing flowClust package which is hampering the loading of openCyto. It is showing the error as  Installing package(s) ‘flowClust’ Package which is only available in source form, and may need compilation of C/C++/Fortran:   ‘flowClust’   These will not be installed instal ...
flowclust rstudio written 2.4 years ago by shadhiksk0 • updated 2.4 years ago by shepherl ♦♦ 1.6k

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