User: ankita.mandal28529

Reputation:
0
Status:
New User
Location:
Last seen:
5 months, 2 weeks ago
Joined:
5 months, 2 weeks ago
Email:
a*****************@gmail.com

Posts by ankita.mandal28529

<prev • 2 results • page 1 of 1 • next >
0
votes
1
answers
215
views
1
answers
Comment: C: Subset of genes can find a term but whole set cannot
... My code:   library(DOSE) library(biomaRt) ensembl=useEnsembl(biomart="ensembl",dataset="hsapiens_gene_ensembl",version=89) geneId<-readLines("First_100_Selected_Gene_name.txt")   try(entrez_gene<-getBM(attributes=c('entrezgene'),filters='hgnc_symbol',values=geneId,mart=ensembl)) write.table( ...
written 5 months ago by ankita.mandal285290
1
vote
1
answer
215
views
1
answer
Subset of genes can find a term but whole set cannot
... I have a set of genes and I want to find out disease ontology term from that set. I have used DOSE and biomaRt R package. If I put a subset of genes, I can get a significant term but if I put the whole set of genes, that term is missing. Is it possible? Or, I have made any mistake? ...
biomart dose written 5 months ago by ankita.mandal285290 • updated 5 months ago by James W. MacDonald45k

Latest awards to ankita.mandal28529

No awards yet. Soon to come :-)

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.2.0
Traffic: 147 users visited in the last hour