User: ben

gravatar for ben
ben30
Reputation:
30
Status:
New User
Location:
Last seen:
5 days, 4 hours ago
Joined:
7 months, 2 weeks ago
Email:
b**********@gmail.com

Posts by ben

<prev • 2 results • page 1 of 1 • next >
0
votes
2
answers
497
views
2
answers
Comment: C: DESeqDataSetFromTximport with kallisto abundances.
... > biocValid() * sessionInfo() R version 3.4.0 (2017-04-21) Platform: x86_64-pc-linux-gnu (64-bit) Running under: Ubuntu 14.04.5 LTS Matrix products: default BLAS: /usr/lib/libblas/libblas.so.3.0 LAPACK: /usr/lib/lapack/liblapack.so.3.0 locale: [1] LC_CTYPE=en_GB.UTF-8 LC_NUMERIC=C ...
written 7 months ago by ben30
3
votes
2
answers
497
views
2
answers
DESeqDataSetFromTximport with kallisto abundances.
... Hi, I'm trying to use DESeq2 to analyse a dataset where I've generated abundances using Kallisto following the vignette "Analyzing RNA-seq data with DESeq2". I'm getting a consistent error with DESeqDataSetFromTximport: > dds <- DESeqDataSetFromTximport(txi.kallisto, samples, ~condition) E ...
deseq2 tximport written 7 months ago by ben30 • updated 3 months ago by Ming Wang0

Latest awards to ben

No awards yet. Soon to come :-)

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.2.0
Traffic: 283 users visited in the last hour