User: cherlyn.t

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cherlyn.t0
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Posts by cherlyn.t

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Comment: C: Clustering of samples based on specific gene sets
... Hi Chris, thank you for your response. I think I could have phrased my question better. I was wondering if I could perform supervised clustering, where I combine all three gene sets (ie, the rows contain genes from all 3 gene sets) and perform clustering. My issue is on how I could ensure that the s ...
written 20 months ago by cherlyn.t0
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Answer: A: incorrect biomaRt output order of gene list
... Hi, James's method is great, but I have found the merge function to be simpler, you can merge both the converted list and your original list by = "ensembl_gene_id ", you just have to change the colname of "V1" to "ensembl_gene_id ". I hope it helps.   ...
written 20 months ago by cherlyn.t0
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Clustering of samples based on specific gene sets
... Hi,   I am working on data obtained from microarray data. Could anyone enlighten me on how I can group my samples based on 3 particular gene sets.  thank you. ...

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