User: Steffen Heyne

gravatar for Steffen Heyne
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MPI-IE, Freiburg, Germany
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4 months, 2 weeks ago
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5 months ago
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Posts by Steffen Heyne

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How to test or estimate differential TSS/promoter usage/expression based on RNA-seq data only
... Hi, there are many methods/workflows out now to get (differential) expression on the transcript-level. Like Salmon+Sleuth, Salmon+tximport+deseq2 or Tophat+StringTie+Ballgown. However I just want to detect the most effected (highest foldchange or hightest absolute expression change) promoter/TSS p ...

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