User: Kushal K Dey

gravatar for Kushal K Dey
Kushal K Dey10
Reputation:
10
Status:
New User
Location:
Chicago, iL
Website:
https://kkdey.github.io/
Twitter:
kanishkadey
Scholar ID:
Google Scholar Page
Last seen:
1 year ago
Joined:
1 year, 10 months ago
Email:
k******@gmail.com

Posts by Kushal K Dey

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Older version is broken. How to remove it or update it?
... I recently updated my package Logolas in Bioc 3.7 (R 3,5) version. While that version works fine, a few of my R users complained that the Bioc 3.6 ( R 3.4) version is now broken. I want to change the Bioc 3.6 version as well or at the least direct users to Bioc 3.7 somehow. What route should I take? ...
biocupgrade logolas old-version written 12 months ago by Kushal K Dey10 • updated 12 months ago by James W. MacDonald50k
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Answer: A: What to use: PCA or tSNE dimension reduction in DESeq2 analysis?
... Mike and Davide have already covered the issue really well. I would just like to stress a couple of points in follow up. I have found t-SNE  to be extremely sensitive to the dimensionality of reduction, the perplexity and the number of iterations run. Mike already posted this, where the authors (Wat ...
written 22 months ago by Kushal K Dey10

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